CANTATAdb - search

Detailed information on CNT30515000

BLAST search results

BLAST vs Swiss-Prot:
sp|P09189|HSP7C_PETHY, E-value = 8e-108

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30549087	Juglans regia	Ipomoea triloba	12.64	29.52	86.25	80	forward
CNT3070359	Juglans regia	Quercus suber	10.27	21.31	86.15	65	forward
CNT30712282	Juglans regia	Glycine max	16.43	23.16	81.73	104	forward
CNT30224553	Juglans regia	Hordeum vulgare	7.42	22.6	93.62	47	forward
CNT30394524	Juglans regia	Triticum turgidum	21.64	37.23	81.02	137	forward
CNT30613938	Juglans regia	Arabis alpina	9.95	24.51	90.48	63	forward

Expression of CNT30515000

Peptides detected in this lncRNA

>peptide 1 (77 aa)
QFSTSSIEFRNKSMLSSANLARVIVELKSIPSYKESTSMVVSIAEERILFALSQAVLNLLRALAFPLMSFWCHLLNI*

Sequence

>CNT30515000
CAATTCTCCACAAGCTCTATAGAATTCCGGAATAAATCCATGTTGAGTTCAGCAAATTTGGCACGGGTAATAGTTGAGCTGAAATCAATACCATCGTACA
AAGAATCAACATCAATGGTAGTCTCAATTGCAGAAGAGAGAATCCTCTTTGCTCTCTCACAAGCAGTTCTCAACCTTCTTAGAGCTCTGGCGTTTCCGCT
TATGTCCTTCTGGTGCCACCTTTTAAATATTTGAACAAAGTGGTTAACCATTCTGTTGTCGAAGTCCTCACCTCCAAGGTGTGTGTCTCCAGCAACAGCC
TTCACTTCAAAACTATTCTCCTCAACGGTAAGAAGTGAGATATCTGCAGTACCACCACCCAGATCAAAGATCAATACATTTCTCTTGCCAATTCTACCCA
CGTTGTCAAGGCCGTAAGCAATTGCAGCGGCGGTTGGTTCATTGAGGATCCGCATGACATTGAGGCCCGCAATGCCACCGGCATCCATTGTGGCCTTACG
CTGAGCGTCATTGAAGTAAGCCGGGACGGTAACAACTGCATTTTTCACCGTCTTGCCCAGATAGGCCTCGGCAATCTCACGCATATTTTTTAGGACCATC
GATGAGATTTCCTCGGCCGCGAATTGTTTATCT