Detailed information on CNT30223246


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520958Hordeum vulgareSetaria italica45.18.2590.43115forward
CNT3070359Hordeum vulgareQuercus suber30.225.2584.4277forward
CNT30367262Hordeum vulgareSorghum bicolor43.9217.8983.04112forward

Expression of CNT30223246

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MVVPRSMPIAGPSPFPAMISSTTQAEKQPRRELRDWLDLGSEHAGREG

>peptide 2 (83 aa)
LVDDPHDVEAGDDACILGGLALGVVEVGGDGDDCVLDGCAEVDADRRPVSFSGHDLVYNSSGKTTSKGIAGLVGSWIGARGKGG

Sequence

>CNT30223246
GCTCGTTGATGATCCGCATGACGTTGAGGCCGGAGATGACGCCTGCATCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCGGGGACGGTGACGAC
TGCGTTCTTGATGGTTGTGCCGAGGTCGATGCCGATCGCCGGCCCGTCTCCTTTTCCGGCCATGATCTCGTCTACAACTCAAGCGGAAAAACAACCTCGA
AGGGAATTGCGGGATTGGTTGGATCTTGGATCGGAGCACGCGGGAAGGGAGGGAG