Detailed information on CNT30712354


BLAST search results

BLAST vs Swiss-Prot:
sp|P11143|HSP70_MAIZE, E-value = 2e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535611Glycine maxEucalyptus grandis27.114.9784125forward
CNT3070359Glycine maxQuercus suber19.3129.1886.5289forward
CNT30146221Glycine maxMedicago truncatula31.6723.2583.56146forward
CNT30367262Glycine maxSorghum bicolor25.8119.0181.51119forward
CNT30424411Glycine maxPapaver somniferum34.4919.880.5159forward

Expression of CNT30712354

Peptides detected in this lncRNA

>peptide 1 (41 aa)
VVIVEHESILFAFSQAVLNLLRALLFPLMSILFFLLNSFTQ*

Sequence

>CNT30712354
GTGGTCATTGTAGAGCATGAGAGTATCCTCTTTGCTTTCTCACAAGCAGTCCTCAACCTCCTAAGGGCTCTTTTGTTTCCACTAATGTCCATTTTATTCT
TTCTCTTAAACTCTTTCACACAGTAAGTCACCATATTGTTATCGAAGTCCTCTCCTCCGAGGTGAGTGTCTCCAGATGTTGCCTTAACTCGGATATAATC
CTTCTCAAAAACAAGAAGAGACACATCCAAAGTACCACCACCAAGATCAAACACAAAAACATTCCTTCTTTCATTATTACAATTTTTCCTTTCAAGCCGA
TATGCAATTGCCGCAGCAGTTGGCTCATTGATGATTCTCAAAACATTGAGGCCAGCAATGGCACCAGCATCTTTGGTAGCTTGTCGCTGAGAGTCATTGA
AGTAAGCTGGCACAGTGATAACAGCATTCTTCACTGTTGATCCAAGGAATGACTCTGCAAT