Detailed information on CNT30146221


BLAST search results

BLAST vs Swiss-Prot:
sp|P09189|HSP7C_PETHY, E-value = 9e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070359Medicago truncatulaQuercus suber11.3123.2885.9271forward
CNT30712354Medicago truncatulaGlycine max23.2531.6783.56146forward

Expression of CNT30146221

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLFLVIIVNNNHGFVIEVANYFEWPQLHITFYYGVAKFPTN*

>peptide 2 (57 aa)
MGLSLRSPITLNGHNFTSLSTMGSQNFRPISLFASTKQKRVVYTLRKTIISLYELII*

>peptide 3 (33 aa)
MATTSHHFLLWGRKISDQLASLHLQNKRELCTL*

>peptide 4 (32 aa)
MLGFFVQTYKVFNAKTHLHKRGWVCCSIPIYIY

>peptide 5 (29 aa)
CNCSCRRLIDYSHNIEASNNTRISSGLAL*

>peptide 6 (33 aa)
AIAAAEGSLIIRITLRPAITPASRVDWRCESLK*

Sequence

>CNT30146221
ATGCAATTGCAGCTGCAGAAGGCTCATTGATTATTCGCATAACATTGAGGCCAGCAATAACACCCGCATCTCGAGTGGACTGGCGTTGTGAGTCATTAAA
GTAAGCAGGCACAGTTATAACAACATCCTTCACTGTTGATCCAAGGTAAGCTTCAGCTATCTCGGCCATTTTTGCCAATACCATCGATGAGATTTCTTCA
GCAGCAAAATGCTTTTCCTCGTCATTATAGTTAACAACAATCATGGGTTTGTCATTGAGGTCGCCAATTACTTTGAATGGCCACAACTTCACATCACTTT
CTACTATGGGGTCGCAAAATTTCCGACCAATTAGCCTCTTTGCATCTACAAAACAAAAGAGAGTTGTGTACACTTTGAGAAAAACAATTATATCGCTTTA
TGAATTAATCATTTGACGTGGATTTAAATAAATCCATATATATATATATATATATCATTTTACAAAATTGACATTAAAAAGTTGAATTACAAAATTGCCC
TTCATTTTACTTGTTTTTAAAAAGGAAATGTTGGGGTTTTTTGTCCAAACATACAAGGTGTTTAATGCTAAAACACACCTTCATAAAAGAGGGTGGGTGT
GTTGTAGCATTCCCATATATATATATAT