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Detailed information on CNT30724228


BLAST search results

BLAST vs Swiss-Prot:
sp|P24067|BIP2_MAIZE, E-value = 1e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670534Lupinus angustifoliusSetaria viridis24.1522.629250forward
CNT30535611Lupinus angustifoliusEucalyptus grandis22.711.8793.6247forward
CNT3070359Lupinus angustifoliusQuercus suber28.519.3488.1459forward
CNT30325214Lupinus angustifoliusAsparagus officinalis38.1626.3384.8179forward

Expression of CNT30724228

Peptides detected in this lncRNA

>peptide 1 (62 aa)
KNTIINCQDTDIKCSTPKIKDKNVLLATFLVQSITIAAAVGSLIILATLRPAITPASLVACL*

>peptide 2 (33 aa)
KTPLSIVKILTSNVPPPRSKTRMFFSPPFLSNP*

>peptide 3 (55 aa)
MFHPQDQRQECSSRHLSCPIHNNSSGCGFINNSSNIKTGNHTSILGGLPLSVIEIS

Sequence

>CNT30724228
CAAAAACACCATTATCAATTGTCAAGATACTGACATCAAATGTTCCACCCCCAAGATCAAAGACAAGAATGTTCTTCTCGCCACCTTTCTTGTCCAATCC
ATAACAATAGCAGCGGCTGTGGGTTCATTAATAATTCTAGCAACATTAAGACCGGCAATCACACCAGCATCCTTGGTGGCCTGCCTCTGAGCGTCATTGA
AATAAGC