Detailed information on CNT30702585


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01516|ALFC1_PEA, E-value = 6e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697376Quercus lobataOryza sativa23.384.1288.8954forward
CNT30676912Quercus lobataSetaria viridis45.8921.3784.91106forward
CNT30524487Quercus lobataSetaria italica39.836.985.8792forward
CNT30273043Quercus lobataChenopodium quinoa41.993.8987.6397forward
CNT30710704Quercus lobataGlycine max49.7814.7890.43115forward
CNT30390900Quercus lobataTriticum turgidum39.8313.2983.792forward
CNT30586189Quercus lobataMusa acuminata50.6516.3987.18117forward
CNT30237267Quercus lobataBrassica oleracea50.2214.384.48116forward
CNT30365623Quercus lobataSorghum bicolor28.145.8287.6965forward
CNT30570125Quercus lobataVitis vinifera83.988787.11194forward
CNT30104230Quercus lobataOryza rufipogon23.382.1988.8954forward
CNT30117905Quercus lobataOryza nivara23.384.6888.8954forward
CNT30725414Quercus lobataLupinus angustifolius49.7812.9189.57115forward

Expression of CNT30702585

Peptides detected in this lncRNA

>peptide 1 (39 aa)
HDSRDSWGDSSLEELEGVIGNLLRGVPFLAFSSRSYHAR*

>peptide 2 (39 aa)
MLGRRKPQPTPSVQLQKSSQCHVHHQARFLAPQLGPTHCP

Sequence

>CNT30702585
CATGATTCCAGGGACAGCTGGGGGGATTCTTCTCTGGAGGAGCTTGAGGGTGTAATCGGCAATCTGCTGAGGGGTGTTCCTTTCCTTGCATTCAGCTCCA
GGAGTTACCATGCTAGGTAGAAGAAAACCTCAGCCCACACCTTCTGTGCAACTTCAAAAGTCCTCTCAATGCCATGTTCACCATCAAGCAAGATTTCTGG
CTCCACAATTGGGACCAACCCATTGTCCTGC