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Detailed information on CNT30512873


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FSY7|BIP_CORAV, E-value = 6e-103

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727335Juglans regiaCorchorus capsularis26.4230.287.76196forward
CNT3086211Juglans regiaVigna radiata19.6822.5784.93146forward
CNT30237452Juglans regiaBrassica oleracea18.0621.2788.81134forward
CNT30243992Juglans regiaAvena sativa44.6151.0879.46331forward
CNT3082625Juglans regiaBrassica juncea18.4643.3584.67137forward
CNT30613247Juglans regiaArabis alpina27.7667.7682.52206forward
CNT30689574Juglans regiaTriticum urartu30.0574.0981.17223forward
CNT30364564Juglans regiaSorghum bicolor21.5634.0480.62160forward
CNT30154231Juglans regiaPrunus persica25.0755.3687.1186forward
CNT30569890Juglans regiaVitis vinifera32.3539.689.58240forward
CNT30704517Juglans regiaPrunus avium21.727.2490.06161forward
CNT3021894Juglans regiaPopulus trichocarpa13.4828.5786100forward
CNT30150244Juglans regiaBrachypodium distachyon17.2524.1581.25128forward
CNT30726090Juglans regiaLupinus angustifolius58.8961.8183.52437forward
CNT3050605Juglans regiaCucumis sativus27.4938.4986.27204forward

Expression of CNT30512873

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MASTIYLNGHGSLLILVSSENLRFLCWDNSVSWDQLGHHSTNSFN

>peptide 2 (49 aa)
MVIFSDLPVPLSSALTFRIPFASTSNVTSICGVPAILCKTPFTFKDLVS*

Sequence

>CNT30512873
CCACCACCGGGGGCACCCCCTGACCTCTGATATACAGCAGTGATGATCGGGTTGCAAACGGCTTCCACCTCTTTGAGCTTCTCATCATAGTCCTCTTTCT
CGGCGCTCTGGTTGTCATCCAGCCATTCAAGGGCATCCTTCACTGCGGTTTCAATTTTGTCCTTCTCATCAGACTCGAGCTTGTCGGCAAGCTTGTCCTT
GTCGTTGATCTGGTTCTTCATGTTGTAGACGTAGGTCTCGAGGCTGTTACGGGCATCAATCTTTTCCTTCACCTTCTTGTCTTCCTCCGCAAACTCTTCT
GCCTCACGAACCATTCGGTCAATCTCTTCCTGGCTCAGGCGACCCTTATCATTTGTGATGGTAATCTTCTCTGATTTACCAGTGCCCTTGTCTTCTGCCT
TAACGTTCAGAATACCATTTGCGTCAACTTCAAACGTCACTTCAATTTGTGGGGTTCCTGCAATCCTTTGTAAGACTCCTTTCACCTTCAAAGACCTGGT
TTCATAATAGGAGCATCCCAACTTTTAGATTAACAGTTTTAGAAAGCAACACATAACTGTGGAAAATATTTGTCCATACTTCATGCGCTGGAAGAAAAAT
AAACAGCATGGCAAGTACCATATACCTGAATGGACACGGTAGTCTGTTGATCCTGGTAAGTAGTGAAAACCTGAGATTTCTTTGTTGGGATAACAGTGTT
TCTTGGGATCAACTTGGTCATCACTCCACCAACAGTTTCAAT