Detailed information on CNT30569910


BLAST search results

BLAST vs Swiss-Prot:
sp|P29357|HSP7E_SPIOL, E-value = 9e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727335Vitis viniferaCorchorus capsularis26.116.4987.85107forward
CNT30237452Vitis viniferaBrassica oleracea25.1216.3587.38103forward
CNT30239820Vitis viniferaAvena sativa24.8839.8486.27102forward
CNT30689574Vitis viniferaTriticum urartu24.8833.8986.27102forward
CNT30726085Vitis viniferaLupinus angustifolius27.5633.8391.15113forward

Expression of CNT30569910

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLKVHHGNHRCCGHQSSPSPSCLPLQTLPPHEPYGQSPPGSGGPCHL*

>peptide 2 (39 aa)
MKNTKVIKQKEYPLKYLHLRQKGGEKKKEGKFFSLYFHR*

>peptide 3 (44 aa)
MGIIAVAGINLLLHLLVFLCKLFRLTNHTVNLLLAQAALVICDGD

Sequence

>CNT30569910
CATTGCAATGGGCAGATTTTGTGGGAAGGAAAAATGTAATTTAACATAAAAGATGAAAAATACAAAAGTAATAAAACAAAAAGAGTATCCCTTGAAGTAT
CTTCACCTCAGACAAAAAGGAGGAGAAAAGAAAAAGGAAGGGAAATTCTTTTCCCTTTACTTCCACCGCTAGAAATATTACATTCTTCATTTTTGCCTAA
ACCTATCAGCCGCATTTCTCCGCCCGATCTCTCTCCGGAGATTACCTGAACTTCAGAGAATGCTCAAAGTTCATCATGGGAATCATCGCTGTTGCGGGCA
TCAATCTTCTCCTTCACCTTCTTGTCTTCCTCTGCAAACTCTTCCGCCTCACGAACCATACGGTCAATCTCCTCCTGGCTCAGGCGGCCCTTGTCATTTG
TGATGGTGAT