Detailed information on CNT30154231


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03682|BIP2_TOBAC, E-value = 6e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512873Prunus persicaJuglans regia55.3625.0787.1186forward
CNT30727335Prunus persicaCorchorus capsularis28.2714.6486.3295forward
CNT3086307Prunus persicaVigna radiata29.1721.5985.7198reverse complement
CNT30237452Prunus persicaBrassica oleracea42.5622.787.41143forward
CNT30239820Prunus persicaAvena sativa42.2655.4788.03142forward
CNT30613247Prunus persicaArabis alpina42.5647.0482.52143forward
CNT30689574Prunus persicaTriticum urartu45.2450.587.5152forward
CNT30364564Prunus persicaSorghum bicolor25.618.388.3786forward
CNT30726090Prunus persicaLupinus angustifolius49.723.6286.83167forward
CNT3050605Prunus persicaCucumis sativus97.0261.5183.44326forward

Expression of CNT30154231

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MRSISSWLRRPLSFVMVIFSDLPVPLSSALTFRIPLA

Sequence

>CNT30154231
CCGCCACCTGGGGCACCACCTGACCTCTGGTAAACAGCTGTGATGATGGGGTTGCATACGGCTTCGACCTCCTTGAGCTTCTCATCATAGTCTTCCTTCT
CCGCCGTCTGGTTGTCGTCCAGCCATTCAAGGGCTTCCTTTGTGGCGGTCTCTAGGCTGTTGCGGGCATCGATCCTCTCCTTCACCTTCTTGTCTTCATC
GGCAAACTCTTCTGCCTCCTTAACCATGCGGTCGATTTCCTCCTGGCTGAGACGACCCTTGTCGTTTGTGATGGTGATCTTCTCGGATTTGCCAGTGCCC
TTGTCTTCTGCCTTGACATTCAGGATACCATTAGCA