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Detailed information on CNT30684514


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 4e-156

BLAST vs NONCODE:
NONBNAT007048, E-value = 1e-91

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672978Triticum urartuSetaria viridis51.8751.7491.29402forward
CNT30618377Triticum urartuSesamum indicum33.6869.9787.74261forward
CNT30194937Triticum urartuPisum sativum52.3940.6485.96406forward
CNT30224132Triticum urartuHordeum vulgare53.9460.9395.69418forward
CNT30540422Triticum urartuBrassica napus53.6860.8285.58416forward
CNT30146334Triticum urartuMedicago truncatula52.3940.8586.21406forward
CNT30440628Triticum urartuAegilops tauschii46.7149.3296.69362forward
CNT30647369Triticum urartuRosa chinensis88.5275.7284.55686forward
CNT30368495Triticum urartuSorghum bicolor54.1941.2288.81420forward
CNT30355601Triticum urartuLactuca sativa86.8488.6784.1673forward
CNT30148140Triticum urartuBrachypodium distachyon44.2690.2694.17343forward

Expression of CNT30684514

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MGLVGIIFTIPASPFFRNLGAASISLPDRLSILVTSSANLTAMWEVWQSSTGA*

>peptide 2 (38 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTAKRPRGG*

Sequence

>CNT30684514
AAAACTTCTGCTAGATAACTCGATGGCAGACACCAGAGCACTCATTTCTTCTTGATGGCAGCCTTGGTAACCTTGGCGCCGGTGGGGTCCTTCTTCTCAA
CGCCCTTGATGACACCAACAGCAACCGTTTGTCTCATGTCACGCACAGCGAAGCGGCCAAGAGGAGGGTAGGTGGCGAAGGTCTCCACAACCATGGGCTT
GGTGGGAATCATCTTCACAATACCAGCGTCACCGTTCTTCAGGAACTTGGGCGCAGCCTCAATCTCCTTACCAGATCGCCTGTCAATCTTGGTCACCAGC
TCAGCAAACTTGACAGCAATGTGGGAGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCGATCTGACCAGGGTGGTTCATGATGATGACCTGAGAGG
TGAAGTTGGCTGCCTCCTTGGCAGGGTCATCCTTGGAGTTGGATGCAACAAACCCACGCTTGATGACACCAGTCTCAACACGTCCAACAGGCACAGTTCC
AATGCCACCAATCTTGTAAACATCCTGAAGGGGAAGACGCAGGGGCTTGTCTGAGGGCCTCTTGGGCTCATTGATCTGGTCAAGAGCCTCAAGAAGGGTA
GGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCAAACCCAGAGATGGGAACAAAGGGAACCTTCTCAGGGTTGTAGCCGA
CCTTCTTCAGGTACGATGAGACTTCCTTGACGATTTCCTCATAACGGGCCTTCGAGTACTTGGGAGTGGTGGCAT