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Detailed information on CNT30618377


BLAST search results

BLAST vs Swiss-Prot:
sp|O24534|EF1A_VICFA, E-value = 6e-61

BLAST vs NONCODE:
NONGMAT001702, E-value = 5e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678319Sesamum indicumSetaria viridis103.4962.8784.72386forward
CNT30639730Sesamum indicumNymphaea colorata102.1441.4683.46381forward
CNT30535563Sesamum indicumEucalyptus grandis104.2947.6784.32389forward
CNT30316757Sesamum indicumCorylus avellana101.8831.7284.47380forward
CNT30194937Sesamum indicumPisum sativum69.7126.0389.62260forward
CNT30503993Sesamum indicumNicotiana attenuata48.7966.1889.01182forward
CNT30712097Sesamum indicumGlycine max68.121.2988.19254forward
CNT30160120Sesamum indicumPistacia vera102.4130.7385.86382forward
CNT30121467Sesamum indicumPhyscomitrium patens54.9630.9282.44205forward
CNT30224132Sesamum indicumHordeum vulgare69.9738.0587.74261forward
CNT30590460Sesamum indicumMusa acuminata55.2353.6585.92206forward
CNT30540422Sesamum indicumBrassica napus68.937.5783.66257forward
CNT30173274Sesamum indicumTrifolium pratense68.919.1188.33257forward
CNT30146334Sesamum indicumMedicago truncatula68.125.5590.55254forward
CNT30440472Sesamum indicumAegilops tauschii69.9743.8787.36261forward
CNT3059230Sesamum indicumArabidopsis lyrata70.2421.888.17262forward
CNT30598015Sesamum indicumFraxinus excelsior67.0249.889.6250forward
CNT30647369Sesamum indicumRosa chinensis67.2927.786.85251forward
CNT30127375Sesamum indicumCorymbia citriodora103.226982.86385forward
CNT30684514Sesamum indicumTriticum urartu69.9733.6887.74261forward
CNT30368495Sesamum indicumSorghum bicolor102.1437.3983.46381forward
CNT30426682Sesamum indicumPapaver somniferum102.6828.9783.03383forward
CNT30148140Sesamum indicumBrachypodium distachyon69.9768.6888.89261forward
CNT30101006Sesamum indicumOryza rufipogon69.1737.0786.82258forward
CNT30603788Sesamum indicumOryza punctata103.4932.7783.94386forward
CNT30724026Sesamum indicumLupinus angustifolius101.6126.3283.11379forward
CNT3050518Sesamum indicumCucumis sativus65.6839.4586.12245forward

Expression of CNT30618377

Peptides detected in this lncRNA

>peptide 1 (46 aa)
STTMGLVGTILTSPASPFFKNLGSFSSSLPERLSIFVTSSANLTAM*

>peptide 2 (57 aa)
MMMTWEVKFAASLAGSSFELEILDSNILHVEPNIVTRKSLLHCFMVHLNRLNFSGQAR

>peptide 3 (84 aa)
LHNHGLGGNHLNKSSITILQELGLLLKLLTRTPVNLCHKLSKFNSNVRGVTVEHGGISISNLARVVHDDDLGGEVCCFLGRVIL*

Sequence

>CNT30618377
CTCCACAACCATGGGCTTGGTGGGAACCATCTTAACAAGTCCAGCATCACCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTACCCGAACGCCTG
TCAATCTTTGTCACAAGCTCAGCAAATTTAACAGCAATGTGAGAGGTGTGACAGTCGAGCACGGGGGCATATCCATTTCCAATCTGGCCAGGGTGGTTCA
TGATGATGACCTGGGAGGTGAAGTTTGCTGCTTCCTTGGCAGGGTCATCCTTTGAGTTGGAGATCCTTGACAGCAACATTCTTCACGTTGAACCCAACAT
TGTCACCAGGAAGAGCCTCCTGCATTGCTTCATGGTGCATCTCAACAGACTTAACTTCAGTGGTCAAGCCAGA