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Detailed information on CNT30194937


BLAST search results

BLAST vs Swiss-Prot:
sp|P50378|EFTU_GONPE, E-value = 6e-07

BLAST vs NONCODE:
NONGMAT001702, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691950Pisum sativumOryza sativa88.1955.9483.77881forward
CNT30673332Pisum sativumSetaria viridis42.9451.4489.51429forward
CNT30521010Pisum sativumSetaria italica88.2980.9285.15882forward
CNT30639730Pisum sativumNymphaea colorata33.8336.7885.5338forward
CNT30535563Pisum sativumEucalyptus grandis78.8896.5782.74788forward
CNT30316757Pisum sativumCorylus avellana75.3862.8586.06753forward
CNT30546799Pisum sativumIpomoea triloba86.5970.4484.74865forward
CNT30518094Pisum sativumJuglans regia88.1994.1282.63881forward
CNT30377782Pisum sativumArabidopsis thaliana69.3768.6183.98693forward
CNT30618377Pisum sativumSesamum indicum26.0369.7189.62260forward
CNT30274113Pisum sativumChenopodium quinoa47.1575.4883.65471forward
CNT3021028Pisum sativumCitrullus lanatus84.3867.8783.04843forward
CNT30727590Pisum sativumCorchorus capsularis86.1963.5485.83861forward
CNT30380230Pisum sativumManihot esculenta87.5936.0784875forward
CNT30525464Pisum sativumPhaseolus vulgaris58.16102.8381.93581forward
CNT30629525Pisum sativumVigna unguiculata38.749086.56387forward
CNT30503993Pisum sativumNicotiana attenuata23.6285.8288.98236forward
CNT30712097Pisum sativumGlycine max41.9435.1288.07419forward
CNT30160120Pisum sativumPistacia vera88.1970.8885.02881forward
CNT30287202Pisum sativumTriticum aestivum35.1448.8284.62351forward
CNT30224132Pisum sativumHordeum vulgare41.2460.0686.65412forward
CNT30387246Pisum sativumTriticum turgidum87.7976.1981.76877forward
CNT30564256Pisum sativumActinidia chinensis60.9652.3283.91609forward
CNT30541587Pisum sativumBrassica napus87.5974.485.6875forward
CNT30233904Pisum sativumBrassica oleracea87.5995.4285.03875forward
CNT30173274Pisum sativumTrifolium pratense85.9963.8792.32859forward
CNT30146334Pisum sativumMedicago truncatula70.4770.8290.34704forward
CNT30440472Pisum sativumAegilops tauschii31.1352.2787.14311forward
CNT30246955Pisum sativumAvena sativa87.7949.6984.04877forward
CNT30665783Pisum sativumTriticum dicoccoides82.1890.1281.24821forward
CNT30310177Pisum sativumCamelina sativa87.5975.4385.49875forward
CNT3059230Pisum sativumArabidopsis lyrata87.5972.885.83875forward
CNT3079066Pisum sativumBrassica juncea87.5973.2884.91875forward
CNT30614135Pisum sativumArabis alpina73.3746.9986.08733forward
CNT30598015Pisum sativumFraxinus excelsior24.9249.690.76249forward
CNT30449495Pisum sativumSaccharum spontaneum87.6971.9884.59876forward
CNT30132437Pisum sativumLolium perenne31.2325.9685.9312forward
CNT3011166Pisum sativumZea mays88.2962.3883.33882forward
CNT30647369Pisum sativumRosa chinensis42.2446.5886.49422forward
CNT30127375Pisum sativumCorymbia citriodora33.1359.3286.71331forward
CNT30684514Pisum sativumTriticum urartu40.6452.3985.96406forward
CNT30350898Pisum sativumEragrostis tef87.5978.5583.43875forward
CNT30368495Pisum sativumSorghum bicolor73.5772.1384.76735forward
CNT30355521Pisum sativumLactuca sativa71.8775.2685.24718forward
CNT30427598Pisum sativumPapaver somniferum87.2963.7486.01872forward
CNT30706337Pisum sativumPrunus avium81.9870.2484.98819forward
CNT30644842Pisum sativumCannabis sativa23.3257.6790.56233forward
CNT3024315Pisum sativumPopulus trichocarpa43.4456.8886.87434forward
CNT3037774Pisum sativumCucumis melo45.6558.9984.21456forward
CNT30148140Pisum sativumBrachypodium distachyon38.0410088.42380forward
CNT30101006Pisum sativumOryza rufipogon39.5456.7586.58395forward
CNT30579541Pisum sativumEchinochloa crusgalli23.8241.3290.76238forward
CNT30496962Pisum sativumDigitaria exilis88.2978.4785.37882forward
CNT30116376Pisum sativumOryza nivara25.1346.2287.65251forward
CNT30594443Pisum sativumEragrostis curvula87.8975.6283.94878forward
CNT30603820Pisum sativumOryza punctata87.7981.2884.04877forward
CNT30176122Pisum sativumVigna angularis84.987583.75849forward
CNT30724026Pisum sativumLupinus angustifolius85.1959.189.66851forward
CNT3050518Pisum sativumCucumis sativus31.4350.5687.58314forward

Expression of CNT30194937

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MTPTATVCLMSLTAKRPRGGYSAKVSTTMGLVGIILTIPASPFFKNLGSFSISLPDRLSILVISSANFTAM*

>peptide 2 (30 aa)
DHRRSRTQFCKFSLMKQAKTSKLNWKDKLL*

>peptide 3 (40 aa)
MLSRASSRVGPLYQSRLVDLSIMLSPSKPEMGTKGILSGL*

>peptide 4 (34 aa)
MMMTWDVKLAASLAGSSLELDATKPRLRSSLQHS*

Sequence

>CNT30194937
TGACCACCGCCGATCAAGAACCCAGTTTTGTAAGTTTAGTTTAATGAAACAGGCAAAAACTTCAAAATTAAACTGGAAAGATAAACTACTATAAAGGAAC
AACTTGTGCAGAAGCAACCATGGAGTGAAATCACTTCTTCTTGGCTGCAGCTTTGGTGACCTTGGCTCCAGTTGGGTCCTTCTTCTCCACACTCTTGATG
ACTCCGACAGCAACAGTTTGTCTCATGTCCCTCACAGCAAAACGTCCAAGAGGAGGATACTCAGCAAAAGTTTCCACCACCATGGGCTTGGTTGGAATCA
TCTTAACCATACCGGCATCACCATTCTTCAAAAACTTGGGCTCCTTCTCAATCTCCTTACCAGATCGCCTGTCAATCTTGGTGATAAGTTCAGCAAACTT
CACAGCAATGTGAGAGGTGTGGCAATCGAGCACTGGTGCATAACCATTTCCAATCTGTCCAGGGTGGTTCATGATGATGACCTGGGATGTGAAGTTGGCA
GCTTCCTTGGCAGGGTCATCCTTGGAGTTGGATGCAACAAAACCACGCTTGAGATCCTCACTGCAACATTCTTAACATTGAATCCGACATTGTCTCCTGG
AAGAGCCTCGGTGAGAGCTCGTGGTGCAATCTCAACGAACTTAACCAACCAGTAGGAGCAAAAGTCACAAGCATACCGGGCTTCACAACACCAGTTTCAA
CACGTCCCACTGGCACAGTTCCAATACCACCAATCTTGTAAACATCTTGCAATGGAAGCCTGAGGGGCTTGTCTGAGGGTCTCTTTGGCTCATTGATGTT
GTCAAGAGCATCAAGTAGAGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCTCCCTCAAAACCAGAGATGGGAACGAAAGGA
ATTTTGTCTGGGTTGTAACCAACCTTCTTCAAGTAGGAAGAAACTTCCTTCACAATTTCCTCATACCTGCCCTTGGAGTACTTAGGGGTGGTAGCATCC