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Detailed information on CNT3044799


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LIC2|TMN7_ARATH, E-value = 2e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671488Prunus dulcisSetaria viridis20.5528.6183.19113forward
CNT30549621Prunus dulcisIpomoea triloba23.8235.7983.97131forward
CNT30375191Prunus dulcisArabidopsis thaliana13.4521.8987.8474forward
CNT30729311Prunus dulcisCorchorus capsularis53.0964.7580.48292forward
CNT30490055Prunus dulcisOlea europaea23.2729.8485.94128forward
CNT30160060Prunus dulcisPistacia vera61.4532.6378.7338forward
CNT30564723Prunus dulcisActinidia chinensis248.1184.85132forward
CNT30314293Prunus dulcisCamelina sativa2441.1281.06132forward
CNT30366513Prunus dulcisSorghum bicolor27.2726.8380150forward
CNT30704258Prunus dulcisPrunus avium23.2721.3383.59128forward
CNT3024022Prunus dulcisPopulus trichocarpa50.5555.8284.17278forward
CNT30150459Prunus dulcisBrachypodium distachyon35.8230.6482.23197forward
CNT30102928Prunus dulcisOryza rufipogon31.4518.3782.08173forward
CNT3063675Prunus dulcisSelaginella moellendorffii26.5543.5880.82146forward

Expression of CNT3044799

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MALIFQTISIPEQTLSQKAQPQKTSPPKLGHSAQRIRQKEFLET*

>peptide 2 (47 aa)
MKTAPNGRMPPISTENTGFIYHACSGTCRGILLVFTGSSTGGFLNPK*

>peptide 3 (34 aa)
TRSMRRNQWFQSGQRKHMKQSACTQSKGSLKLAL*

Sequence

>CNT3044799
AACCAGAAGCATGCGTAGAAACCAATGGTTCCAGTCAGGACAAAGAAAGCATATGAAACAATCAGCATGTACCCAAAGTAAAGGATCCCTGAAACTAGCT
TTGTGATCTCCAACTTGGTAAAGAAGTAGAAGGATAACAAACACAATAAAAAGGAAGCCGAAGATATAATAGAACTGGTTCAGCCAAATTGATGTCAAGA
TAAAGAAAAGCTCAATGAAAACAGCTCCAAATGGAAGAATGCCTCCAATAAGTACAGAGAACACTGGTTTCATATACCATGCCTGCTCTGGCACCTGCCG
AGGAATTTTGTTAGTCTTCACAGGGTCTTCAACAGGTGGTTTCTTGAACCCCAAATAACTACCCACAAAGACCAATGGCACTGATATTCCAAACCATAAG
CATACCAGAGCAAACATTGTCCCAAAAGGCACAGCCCCAGAAGACTTCTCCCCCCAAATTAGGGCATTCAGCACAAAGAATACGGCAAAAAGAATTCCTG
GAAACATAAAGGCAGTCTTTAAGGTATTCCTCTTCCACTCTGTACCCTTG