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Detailed information on CNT30562094


BLAST search results

BLAST vs Swiss-Prot:
sp|P09189|HSP7C_PETHY, E-value = 2e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223130Actinidia chinensisHordeum vulgare10.7522.2291.0756forward
CNT30394412Actinidia chinensisTriticum turgidum26.4916.1488.41138forward
CNT30625786Actinidia chinensisDaucus carota24.1814.7584.92126forward

Expression of CNT30562094

Peptides detected in this lncRNA

>peptide 1 (29 aa)
WLHPICNGESRITPATAVTLRPVTTSKAN*

Sequence

>CNT30562094
TCTGGTTACACCCCATTTGTAACGGAGAAAGTCGAATCACACCCGCAACGGCCGTTACACTCCGGCCCGTAACAACATCTAAAGCAAACTAGTAGATCCG
GTAGACCATATTATGGCCACTAACAGATCCAAATAAAATTAGAGAGAGAAAGAGAGAGGAGTCTTACCGAATACAGTGTTAATGTAGTTCATGGCGACCT
GATTCTTGGCGGCGGCGCCGATCAACCGTTCGGTGTCGGTGAAGCCGACGTAGGACGGCTTCGTACGGTTGCCTTGGTCGTTGGCGATGATCTCGACGCG
GTCGTGCCGCCATACCCCGACGCACGAGTAGGTCGTGCCGAGATCGATTCCGATCGCCGGTCCCTCTCCCTTTCCGGCCATAACTTCTGAGAGAGAGGGG
TACAGTAATCTAGGGTTTTGGAATTCCTTTGGAGATGAAGAAAGAGATGGCTTTATAGGAGTATTACCGCGTTGTTCTCGGTTATCCGGAATGTTCGAAA
CCCTAGCCTCCGCCACCTTAC