Detailed information on CNT30592989


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SRN0|NHL1_ARATH, E-value = 1e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697688Eragrostis curvulaOryza sativa70.6528.4688.03142reverse complement
CNT30677272Eragrostis curvulaSetaria viridis33.3329.5288.0667reverse complement
CNT30523972Eragrostis curvulaSetaria italica55.2228.6892.79111reverse complement
CNT30552828Eragrostis curvulaOryza glaberrima21.898.1390.9144reverse complement
CNT30461908Eragrostis curvulaSaccharum spontaneum21.893.5690.9144reverse complement
CNT30136525Eragrostis curvulaLolium perenne21.897.5590.9144reverse complement
CNT306909Eragrostis curvulaZea mays42.7932.8283.7286reverse complement
CNT30685285Eragrostis curvulaTriticum urartu71.147.0188.81143reverse complement
CNT30341811Eragrostis curvulaEragrostis tef98.0113.3691.37197reverse complement
CNT30365453Eragrostis curvulaSorghum bicolor47.2635.8585.2695reverse complement
CNT30595730Eragrostis curvulaOryza meridionalis21.895.8493.1844reverse complement
CNT30371426Eragrostis curvulaOryza glumipatula70.6515.0788.03142forward
CNT30578381Eragrostis curvulaOryza barthii36.325.8694.5273reverse complement
CNT30116075Eragrostis curvulaOryza nivara21.894.3390.9144reverse complement

Expression of CNT30592989

Peptides detected in this lncRNA

>peptide 1 (65 aa)
PYLADALGNDVANGYLIMEVKIDGRVRWKVGSWTSGHYHIFVTCPAFFITSGGNGVQGASGLRFQT

Sequence

>CNT30592989
GCCCTACCTCGCCGACGCGCTCGGCAATGACGTTGCCAACGGGTACCTGATCATGGAGGTCAAGATCGACGGCCGCGTCCGGTGGAAGGTCGGCAGCTGG
ACCTCAGGACACTACCACATCTTCGTCACATGCCCAGCCTTCTTCATCACCAGCGGCGGCAACGGCGTCCAAGGCGCCAGCGGGCTCAGGTTCCAGACGG
C