Detailed information on CNT30677272


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697688Setaria viridisOryza sativa21.159.6291.6748forward
CNT306909Setaria viridisZea mays26.8723.2891.861forward
CNT30341811Setaria viridisEragrostis tef26.434.079060forward
CNT30371426Setaria viridisOryza glumipatula21.155.191.6748reverse complement
CNT30592989Setaria viridisEragrostis curvula29.5233.3388.0667reverse complement

Expression of CNT30677272

Peptides detected in this lncRNA

>peptide 1 (74 aa)
QANLPRRSRASRVQNRATEQVRLDLDAAVGGRLEPEPVRPDDAVCAAADEVSRAGDEDVVVPGRPAAGAWRPGG*

Sequence

>CNT30677272
CAAGCCAACCTACCTCGCCGGAGCAGAGCAAGCAGAGTCCAGAACAGAGCAACTGAGCAAGTCAGGTTAGACCTCGACGCGGCAGTAGGTGGGCGTCTGG
AACCTGAGCCCGTGCGCCCCGACGACGCTGTATGTGCCGCTGCTGATGAAGTAAGCCGGGCAGGTGACGAAGATGTGGTAGTGCCCGGACGTCCAGCTGC
CGGAGCGTGGCGTCCTGGAGGATGAAG