Detailed information on CNT306909


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SRN0|NHL1_ARATH, E-value = 3e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697688Zea maysOryza sativa35.518.6486.0293forward
CNT30677272Zea maysSetaria viridis23.2826.8791.861forward
CNT30523972Zea maysSetaria italica21.3714.4789.2956forward
CNT30295392Zea maysTriticum aestivum28.6312.6789.3375forward
CNT30663631Zea maysTriticum dicoccoides26.7215.7387.1470forward
CNT30136525Zea maysLolium perenne30.5313.7287.580forward
CNT30685285Zea maysTriticum urartu35.54.5684.9593forward
CNT30365453Zea maysSorghum bicolor39.3138.8791.26103forward
CNT30371426Zea maysOryza glumipatula35.59.8786.0293reverse complement
CNT30578431Zea maysOryza barthii30.926.3893.8381forward
CNT30592989Zea maysEragrostis curvula32.8242.7983.7286reverse complement

Expression of CNT306909

Peptides detected in this lncRNA

>peptide 1 (86 aa)
LEPEPVRADSAAVAGAGAGADEVSRAGDEHVVVARHPAADLPADPPVDPELQDEEGREGDGGAGQHGRPDVDVAVALVHRGQPGRQR

Sequence

>CNT306909
CTGGAACCTGAGCCCGTGCGCGCCGACAGCGCCGCGGTAGCCGGAGCCGGCGCCGGAGCTGATGAAGTAAGCCGGGCAGGTGACGAACATGTGGTAGTGG
CCCGACACCCAGCTGCCGACCTTCCAGCGGACCCTCCCGTCGATCCTGAGCTGCAGGACGAGGAAGGGCGCGAAGGGGACGGCGGGGCCGGCCAGCACGG
GCGACCAGACGTCGACGTCGCCGTGGCCCTGGTACACCGCGGGCAGCCTGGACGCCAGCGTC