Detailed information on CNT30697688


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677272Oryza sativaSetaria viridis9.6221.1591.6748forward
CNT30523972Oryza sativaSetaria italica31.8641.0990.57159forward
CNT30318404Oryza sativaCorylus avellana19.6420.9483.6798forward
CNT30295392Oryza sativaTriticum aestivum20.6417.485.44103forward
CNT30255788Oryza sativaAvena sativa24.8525.9491.13124forward
CNT30663631Oryza sativaTriticum dicoccoides19.4421.810097forward
CNT306909Oryza sativaZea mays18.6435.586.0293forward
CNT30685285Oryza sativaTriticum urartu52.5112.8487.02262forward
CNT30353455Oryza sativaEragrostis tef33.0722.6389.7165reverse complement
CNT30365453Oryza sativaSorghum bicolor19.0435.8588.4295forward
CNT30371426Oryza sativaOryza glumipatula41.6822.0899.52208reverse complement
CNT30578381Oryza sativaOryza barthii72.3428.9793.91361forward
CNT30117133Oryza sativaOryza nivara22.0434.9297.27110forward
CNT30592989Oryza sativaEragrostis curvula28.4670.6588.03142reverse complement

Expression of CNT30697688

Peptides detected in this lncRNA

>peptide 1 (78 aa)
VAVGGSLEPEAAGAGGAIAAGGDEEGRAGDEEVVVAGDPAADLPPDAAVDLDLEDEVARLAILRDGVGEAATVICWYL*

Sequence

>CNT30697688
GTGGCAGTAGGTGGTAGTCTGGAACCTGAAGCCGCTGGCGCCGGGGGAGCCATTGCCGCCGGCGGTGACGAGGAAGGCCGGGCAGGTGACGAAGAGGTGG
TAGTGGCCGGAGATCCAGCTGCCGACCTTCCACCGGACGCGGCCGTCGATCTTGACCTGGAGGATGAGGTAGCCCGCCTGGCAATCCTGCGAGATGGCGT
CGGCGAGGCGGCGACGGTGATCTGCTGGTACTTGTAGGAGGCGTAGACGTCGAGGCGGTCGTAGTAGACGCCGACGCGGTCGTTGGGGTTGCGGGAGGCG
ACGGTGACCTGGATGGTGGTGGAGAGGACGCCGCCGGCGGTGGAGGAGGAGTTGGAGAGGTCGAGCTGGCGGAGGGTGGCGTCCTGGAGGTAGAAGCGAG
GGTGGGTGGGGCGGAGGACGAGGTAGACGATGAGGGCGATGATGCCGACGAGGATGGCGAGGACGACGAGGACGGTGATGAATCGCCGGCATCCCTGCC