Detailed information on CNT30412746


BLAST search results

BLAST vs Swiss-Prot:
sp|P25776|ORYA_ORYSJ, E-value = 2e-74

BLAST vs NONCODE:
NONVVIT001489, E-value = 3e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548101Papaver somniferumIpomoea triloba11.8525.978580forward
CNT30372246Papaver somniferumArabidopsis thaliana42.9625.3179.31290forward
CNT3042661Papaver somniferumPrunus dulcis10.9625.0886.4974forward
CNT30163304Papaver somniferumPistacia vera10.372085.7170forward
CNT3098341Papaver somniferumSolanum tuberosum16.8920.1181.58114forward
CNT30586158Papaver somniferumMusa acuminata24.339.5280.49164forward
CNT30236731Papaver somniferumBrassica oleracea18.5231.4182.4125forward
CNT30143968Papaver somniferumMedicago truncatula13.1926.4184.2789forward
CNT3079853Papaver somniferumBrassica juncea11.8527.6887.580forward
CNT30718215Papaver somniferumMalus domestica golden10.5231.4288.7371forward
CNT30119217Papaver somniferumCitrus clementina20.7415.5481.43140forward

Expression of CNT30412746

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSSLQSSNLYHLQSHIQQLRHHDPMKFHIFH*

>peptide 2 (90 aa)
MEKSCICVSTAIKPEFVHKCTSIGSGFNIANGVIMWATTVVIFTTRSRFKWAASPSKAILSILIHTTASGALWAGVVIVTNGRWCHWSGR*

Sequence

>CNT30412746
AAATAGAGACTGGATTTACAAAGGATTTCAAGGGAAACCGACAATGGCAATGTTGTTTTGTTCATATGCGATAGAGGAATAATGAAACTTATATACAAAT
CTATTATCTTAAATTAAAATGGACAAATCTTCTATCCAATTGTTTCTGATAAACCCATAGTCTAGCTATGGAGAAAAGCTGTATTTGTGTGTCTACTGCT
ATTAAGCCAGAGTTTGTCCACAAATGCACCTCCATTGGTTCCGGCTTCAACATTGCAAACGGGGTAATCATGTGGGCAACAACTGTCGTGATCTTCACAA
CACGTAGCAGATTCAAGTGGGCAGCATCCCCAAGCAAAGCAATACTTTCCATACTCATACACACAACAGCAAGTGGTGCTTTGTGGGCAGGTGTAGTAAT
TGTCACAAACGGACGGTGGTGCCACTGGAGTGGGAGGTGAAGGACCAGGGTTTGGAGGGTTGTCTCCTTTCTTGGTTGGGTAGGAAGCTTCCATTGCGAT
CCCACACTTTCCAGTTGTAGTATCAGCAAGGTTACGCTCCATCCTGATGTATCCTTTCTCTCCCCAGCTTGCACCCCATGAGTTCTTTACAATCCAGTAA
TCTTTACCATCTTCAGAGCCATATCCAACAGCTGCGACACCATGATCCAATGAAGTTCCACATTTTCCACTGAAT