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Detailed information on CNT30319475


BLAST search results

BLAST vs Swiss-Prot:
sp|P25776|ORYA_ORYSJ, E-value = 7e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042661Asparagus officinalisPrunus dulcis2.5322.0386.1565forward
CNT30586158Asparagus officinalisMusa acuminata10.2963.6179.55264forward
CNT30143968Asparagus officinalisMedicago truncatula2.7721.0787.3271forward
CNT3067329Asparagus officinalisLeersia perrieri2.1121.2692.5954forward
CNT30718002Asparagus officinalisMalus domestica golden3.5930.5685.8792forward
CNT30585367Asparagus officinalisEchinochloa crusgalli2.32089.8359forward

Expression of CNT30319475

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MRAAAVVILTACSSFKRTTSPSKTGTTSLEHAAARHSIRARIVAITNTGGLHRGRRGWAWVGWVRAFLDGVRRLDRNSTLADT*

>peptide 2 (41 aa)
SRKFHGFNSPSDKRYKSKVAITPTFWFTDRTVKLKPMYKSY*

>peptide 3 (37 aa)
MQWQSTLKCVLMGFVDELLWCCLNIFSTISNVAGDFL*

>peptide 4 (53 aa)
MLMCLNVEQYILLNEQAQNLKTKTYLMKHVYHEIYLSSKVVNEKINSSHRSAI*

>peptide 5 (47 aa)
MMMQEIEKLVGINYRTGQLMNLMPAGSRPEIARYVNVPQCGAIYSPK*

>peptide 6 (30 aa)
MILDRLQKILLFIGFAEKPTKVSLKWPRRF*

>peptide 7 (30 aa)
MTSLAVSDSYCDTIIITSYTFKFVSVYLNN*

Sequence

>CNT30319475
ATCAAGGAAATTTCACGGATTTAACAGCCCCAGCGACAAACGTTACAAGAGCAAAGTTGCAATAACACCAACATTTTGGTTTACAGATCGAACTGTGAAA
CTTAAACCTATGTACAAGAGCTACTAACCATCATCATATAAAATAAACAAGCAAGGATTGCTGTTTAGGTACGTAAATACAATAGAGGGGTGAGGTTTAA
TTATCACAAAAACCTTGGTCCAAATTTAAGCTGCTTTCTTCTCACCCACTTGGTACATATTACACATAAATCACTGCTTCTTGTTTTCTGCATCTAAGAA
ACCCCAGTGAGGTTTTGCTGGGATACGAGCAAGAGCCTTCACTCCCAGAGGATTTTTCTTGCTCTGTGAACATTTACAAGAAACTTGATTAGAACATGAC
TATAAAAAGCAAAACAAAGATCAGCTTGCTAGAATGCTTTAGTATCATCATAAACTAGCTTGGCTTACTTTTTGAATCAGACATCAGTGTGTGGACTCTA
ATAATAACATGATTTTGGATAGATAGCAGAAATCAGGCATCAGTGTGTGGACTCTTAATAATAACATGATTTTGGATAGATTGCAGAAAATCCTCCTCTT
TATTGGATTCGCAGAAAAGCCAACCAAGGTTTCTCTCAAGTGGCCACGCCGCTTCTAGTACACTAAAAATTTGAAGTTACGGTGAGTCGTTCAGGGTTAC
AATTCCTTGCTCATAACATCCCTCCATAAACAGAGTGTCCCATTCACGAGGCTGAAAACCGAACTGTTCTATGCAATGGCAATCTACTCTTAAATGTGTG
CTTATGGGATTTGTGGATGAGTTACTCTGGTGTTGTCTTAATATCTTTTCCACCATATCGAATGTTGCAGGGGATTTTCTATAATTCTTAGTAACCATAG
GGAGATTTCTCATAATTATTCAGTTTTTTTAAATTACCAAGTTTAAGAGAGAGAAGCAACTTACAGTTAGACAAGTTCCAGCCCCAACATCGCAGATGGG
ATAGTCATGAGGGCAGCAGCTGTAGTGATCCTCACAGCATGTAGCTCCTTCAAGAGGACAACATCCCCAAGCAAAACAGGAACGACCAGTCTCGAACACG
CAGCAGCACGTCATTCCATCAGGGCACGAATAGTAGCTATCACAAACACTGGGGGGCTTCACAGGGGAAGGAGGGGATGGGCCTGGGTTGGGTGGGTTCG
GGCCTTTCTTGATGGGGTAAGAAGGCTCGATCGCAATTCCACACTTGCCGACACTTGAAGCAATGTTGCGCTCGAGCTTGATGTAGCCAGCCTCTCCCCA
GGATTCGCCCCAGGAGTTACGGACGAGCCAGTAGTCTTTGCCGTTCTCGGTGCCGTAGCCTACAGCTGTGACGCCGTGGTCTAGATCAGTGCCGCATCTT
CCGGTGAATATGCCCTGTAATGCAATAAGGGGAGCATATTTAACTTGGTGAACCAGGAAAAATTAACATTTAGTTTTTGTGCTATGAGAATTCAGAATCA
ACACAAAGTAAAAAAGTTGTTTGATATCAACAGGTTGTTTGGTCAACAGGAATAGAGTTACAACGGTAAATGTTGCAGCCAAGTTCCGATGTTTAATGTT
TGGTTAACGACATGTTAGTTAATGGTGTGAGTCCTTGCATTAATTAAAAAAATTAAAAACTAATGTCATGTCATCAGGTCGTGGATTTCAACGTTTAAGA
TAAGATTATGAATGATGATGCAAGAGATAGAAAAATTAGTAGGAATCAATTATAGAACTGGACAACTTATGAATCTTATGCCCGCAGGTAGTCGACCAGA
AATAGCAAGATATGTTAATGTGCCTCAATGTGGAGCAATATATTCTCCTAAATGAACAAGCACAAAACCTAAAAACTAAAACATATCTAATGAAACATGT
GTATCATGAAATATATTTATCTTCGAAAGTAGTCAATGAGAAAATTAATTCAAGCCATAGATCTGCAATCTAAAATCTGAAACTGACATCAAATCAGTGG
ACTCATAAAAAAGTTTAATTCAATCATGTAACATAGAGATCTCACCGATTGATAAAGTTGGAATGCCCTTCCCGATGATTCAATTGCAATACTAACAGGC
TGGTTGGCAACGGCCTTCTTCAAGGCATTCTCGTCATTCTCTGGAACATCTTCATACGAGTCAATTGATACAACCTTGGCGTTTTTCTGCAAAAAATAAA
GAATAAAAACACAAATGAGGATCAAAACACCAAATATGCATCTATATCCAAAACATCCAGTATTCGAAGGTATAGGCTTCCAGCCCCATTCCTGCATATA
ATTCTAACTGATGTGGTGTACATCATATGATTCCAAAAAGGCAACAATGGACATGAATTCATGGCCATAATTGTCAATACCTGCACCATGATTGCAACTA
GAACATGACATCCCTTGCAGTATCAGACAGTTATTGTGATACAATAATTATCACATCATATACTTTTAAGTTTGTTAGTGTATATTTAAATAATTAACTT
GGTATAATCTGGACCAAATGCTAAAATGAGCAAATCAGGTTAATGAGATAAGGTTATAAACCCTG