Detailed information on CNT30525537


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316252Phaseolus vulgarisCorylus avellana20.9818.0893.7564reverse complement
CNT30381728Phaseolus vulgarisManihot esculenta22.6222.489.8669forward
CNT30406606Phaseolus vulgarisBeta vulgaris23.2822.9891.5571forward
CNT30503388Phaseolus vulgarisNicotiana attenuata20.9821.0587.564forward
CNT30158948Phaseolus vulgarisPistacia vera20.9818.0389.0664reverse complement
CNT30233957Phaseolus vulgarisBrassica oleracea22.9523.189070forward
CNT30510805Phaseolus vulgarisSolanum lycopersicum21.3121.3187.6965forward
CNT30260145Phaseolus vulgarisBrassica rapa22.9523.189070forward
CNT30654098Phaseolus vulgarisRosa chinensis23.6123.2390.2872forward
CNT30714740Phaseolus vulgarisMalus domestica golden20.9820.7889.0664forward
CNT30478496Phaseolus vulgarisArabidopsis halleri2028.590.1661forward
CNT30153271Phaseolus vulgarisPrunus persica20.9821.1290.6264forward
CNT30644781Phaseolus vulgarisCannabis sativa23.2830.4791.5571reverse complement
CNT3058191Phaseolus vulgarisAmborella trichopoda20.6620.5290.4863forward

Expression of CNT30525537

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MATLSWTGGCSMLPAHFKPVFGQWNLGESLDFFDPKSKGNA*

>peptide 2 (40 aa)
MREAGFTEQRQPSTLGSGGITGCLHLRPIINWVCQAYEPSF

Sequence

>CNT30525537
GCCGAGCTAAGTTGCGATAGCTTGTAACTCATGTGATGGCGTAAGGGTGATTGAACTTAGTCATGGCTACGCTCAGTTGGACTGGGGGTTGCTCTATGCT
GCCTGCCCACTTCAAGCCAGTATTTGGTCAATGGAATTTGGGCGAAAGCTTGGATTTCTTTGATCCTAAATCGAAGGGTAATGCGTGAGGCTGGTTTCAC
AGAGCAGCGACAACCTTCCACTCTTGGCAGTGGAGGGATAACGGGTTGCCTGCACCTTCGGCCCATAATCAACTGGGTGTGCCAAGCATATGAACCATCA
TTTTT