Detailed information on CNT30158948


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070208Pistacia veraQuercus suber31.5543.9284.82112forward
CNT30403379Pistacia veraBeta vulgaris22.8226.388.8981reverse complement
CNT30525537Pistacia veraPhaseolus vulgaris18.0320.9889.0664reverse complement
CNT30120686Pistacia veraCitrus clementina69.381.7384.96246forward
CNT3050857Pistacia veraCucumis sativus20.8524.1887.8474reverse complement

Expression of CNT30158948

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MKLKKKKKQKKVVVQLSWAFRALMSMMGTDPLSIH*

Sequence

>CNT30158948
CCTGTTATAGAGTAAAATATCAAATGAGATAGATGAAATTAAAAAAAAAAAAAAAACAGAAAAAAGTGGTTGTCCAATTGAGTTGGGCTTTCCGGGCATT
GATGAGCATGATGGGAACCGACCCGTTATCCATCCACTGACAAGAGCGGGAGGTAGTCGCTGCTCTGTGACCAGCCTCACGCTGTATCCTCCACTTTAGG
AACCATATGGTCCAGACCTTCGCCCAGCCCACGAGGTTCAACTCTCTACTTGGATTGGGCGAGCCAATATACGACCCAGCAAACCCAACCTGAGAAGCCC
AGCCAGCGTCCAACCACTTTAATGCCCCACTTGGTTACAGGCCCTCGTTGCTGAG