Detailed information on CNT30654098


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525537Rosa chinensisPhaseolus vulgaris23.2323.6190.2872forward
CNT30510805Rosa chinensisSolanum lycopersicum22.923.2890.1471forward
CNT30172405Rosa chinensisTrifolium pratense17.7424.2392.7355forward
CNT30354850Rosa chinensisLactuca sativa27.4210.6889.4185forward

Expression of CNT30654098

Peptides detected in this lncRNA

>peptide 1 (92 aa)
RAWSRQLMTLVGARGCWNFGSALAGWVRNGYILTRPFQARSWAMWLGRRLWASWFLERRAMREAGFTEQRSPTSLCSGRITGRCLLVPTMTR*

>peptide 2 (62 aa)
PSLVTPAYDPSGGTRVLELWFSISWLGSEWLYSDSPVPSKELGYVAWAKALGFMVPREEGNA*

Sequence

>CNT30654098
GCCGAGCTTGGTCACGCCAGCTTATGACCCTAGTGGGGGCACGAGGGTGCTGGAACTTTGGTTCAGCATTAGCTGGTTGGGTTCGGAATGGCTATATTCT
GACTCGCCCGTTCCAAGCAAGGAGTTGGGCTATGTGGCTTGGGCGAAGGCTCTGGGCTTCATGGTTCCTAGAGAGGAGGGCAATGCGTGAGGCTGGTTTC
ACAGAGCAGCGATCACCTACCTCTCTTTGCAGTGGAAGGATAACGGGTCGGTGCCTTCTGGTTCCCACCATGACCCGCTAGGCTGTTCCATTCGAACCAA
CACTTTTTTT