Detailed information on CNT30233957


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525537Brassica oleraceaPhaseolus vulgaris23.1822.959070forward
CNT30502422Brassica oleraceaNicotiana attenuata27.4827.385.5483forward
CNT30544569Brassica oleraceaBrassica napus10010097.68302forward
CNT30260145Brassica oleraceaBrassica rapa10010095.7302forward
CNT30153271Brassica oleraceaPrunus persica23.8423.7688.8972forward
CNT3026785Brassica oleraceaPopulus trichocarpa22.1922.1189.5567forward

Expression of CNT30233957

Peptides detected in this lncRNA

>peptide 1 (99 aa)
SSSVTRVCNPCGDNKMMERWPGPPVGSVWHFLDRPVQAESDPFVLVEGLTQAVPKEGRAMREAGFTEQRSPSSLGSGRITDQSHSDPHGLVARTQLNHHL

Sequence

>CNT30233957
GTCGAGCTCAGTAACTAGAGTTTGTAACCCATGTGGGGACAATAAGATGATGGAACGCTGGCCCGGCCCACCGGTCGGTTCTGTCTGGCATTTTCTGGAC
CGCCCAGTCCAAGCCGAGAGTGATCCGTTTGTGTTAGTCGAAGGCTTGACTCAGGCGGTTCCTAAAGAGGGGAGGGCAATGCGTGAGGCTGGTTTCACAG
AGCAGCGATCACCTTCCTCTCTCGGCAGTGGACGAATAACGGATCAAAGCCACTCAGATCCACATGGCCTGGTGGCTCGTACCCAGCTGAACCACCATCT
TT