Detailed information on CNT30260145


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547627Brassica rapaIpomoea triloba23.186.929070reverse complement
CNT30525537Brassica rapaPhaseolus vulgaris23.1822.959070forward
CNT3096133Brassica rapaSolanum tuberosum27.8127.7286.984forward
CNT30563209Brassica rapaActinidia chinensis23.8421.4391.6772reverse complement
CNT30544569Brassica rapaBrassica napus10010097.35302forward
CNT30233957Brassica rapaBrassica oleracea10010095.7302forward
CNT30172978Brassica rapaTrifolium pratense22.8522.5586.9669forward
CNT30128358Brassica rapaCorymbia citriodora20.5322.4690.3262reverse complement
CNT30153271Brassica rapaPrunus persica23.8423.7691.6772forward
CNT30409088Brassica rapaPapaver somniferum22.1920.4991.0467reverse complement

Expression of CNT30260145

Peptides detected in this lncRNA

>peptide 1 (99 aa)
SSSVTRVCDPCGDNKMVEHCPGPPVGSVWHLLDRPVQTESDPFVLGEGLTQAFPKEGRAMREAGFTEQRSPPSLGSGRITDESHSDPHGLVARTQLNHHL

>peptide 2 (30 aa)
MWGQQDGGTLSRPTGRFCLASSGPPSPNRE*

Sequence

>CNT30260145
GTCGAGCTCAGTAACAAGAGTTTGTGACCCATGTGGGGACAACAAGATGGTGGAACACTGTCCCGGCCCACCGGTCGGTTCTGTCTGGCATCTTCTGGAC
CGCCCAGTCCAAACCGAGAGTGATCCGTTTGTGTTAGGCGAAGGCTTGACTCAGGCGTTTCCTAAAGAGGGGAGGGCAATGCGTGAGGCTGGTTTCACAG
AGCAGCGATCACCTCCCTCTCTCGGCAGTGGACGGATAACGGATGAAAGCCACTCAGATCCACATGGCCTGGTGGCTCGTACCCAGCTGAACCACCATCT
TT