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Detailed information on CNT30524978


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 3e-130

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641294Phaseolus vulgarisNymphaea colorata59.4445.7184.02463forward
CNT30534609Phaseolus vulgarisEucalyptus grandis63.5445.3786.06495forward
CNT30728214Phaseolus vulgarisCorchorus capsularis51.2247.3984.46399forward
CNT30629263Phaseolus vulgarisVigna unguiculata76.3857.8296.97595forward
CNT30709622Phaseolus vulgarisGlycine max77.7976.1390.92606forward
CNT3088186Phaseolus vulgarisVigna radiata77.2855.2396.35602forward
CNT30234656Phaseolus vulgarisBrassica oleracea47.2467.1584.51368forward
CNT30145222Phaseolus vulgarisMedicago truncatula51.8660.385.15404forward
CNT30621216Phaseolus vulgarisCajanus cajan60.8562.1290.3474forward
CNT30359252Phaseolus vulgarisLactuca sativa51.4843.4984.79401forward
CNT3055180Phaseolus vulgarisAmborella trichopoda59.1844.6383.08461forward
CNT30176338Phaseolus vulgarisVigna angularis42.7536.7197.3333forward

Expression of CNT30524978

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (39 aa)
MLTLPTSGADGASLTALPAREGDESAMEDAAAIVARNLLS

Sequence

>CNT30524978
TTTGTAAAAAGCAATTAACATTAAGTTGGATCGGATACACAAGATGATTCACGTTATGTGAAGTACATTGCAATAACATATACTTCAACAAACAGAAGTC
TAAAACTCTCGAATCCACAAGTCATTCTGATGGTGCTCACTTTCCGGGGACGAAGTTGGTGGCGTAGGCCCAATGGGTCGAAGCTGCCACCGGGGTAAAT
GGGGTCAGTGATCTCACCGAGAGGCCCACCGGCAATACGGTAACCCTCGACGGCGCCCATGAGGATGACTTGGGTGGCCCAGATGGCGAGGATGCTCTGA
GCGTGGACGAGGCTTGGGTTTCCCAAGTAGTCGAGCCCACCCTCGCTGAAGATCTGGGAACCAGCTTTGAACCAGACGGCCTCGCCGAATTTCACGCCGT
TGCGGGACAGGAGTTCGGGGAAGACGCAGCCCAAGGCTCCGAGCATGGCCCACCTGGAGTGGATGACTTCCAGCTCACGGTTCTTGGCGAAGGTTTCTGG
GTCAGCGGAAAGCCCAGCAGTGTCCCAACCGTAGTCACCTGGGAACTCGCCGGTGAGGTAGGATGGGGCCTCGCCGGAGAATGGGCCCAAGTACTTGACA
CGGTCTGGGCCGTACCATGGGCTTCCGGAGGAGGCCTGCTTGGTGACGGCCTTCCTCATGCTGACCCTCCCGACTTCCGGGGCTGATGGGGCAAGCTTGA
CGGCCTTGCCAGCCAGGGAGGGGGATGAGAGCGCCATGGAGGATGCAGCAGCCATTGTTGCAAGGAACTTGCTTTCTTC