« Back to Glycine max search


Detailed information on CNT30709622


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 6e-134

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524978Glycine maxPhaseolus vulgaris76.1377.7990.92606forward

Expression of CNT30709622

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGPASRPCQPRMGMREPWKKLLPFFNSRMSFALCFVL*

>peptide 2 (34 aa)
MLTLPTSGADGPSFTALPAKDGDERAMEEAAAIF*

>peptide 3 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30709622
TTGAGTTTTGTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAATTCACATTATCTGAAGTACTTCACCAAACACAAATCTAAAAACTCT
CAAAAGTCATTTCGTTCTTTGACGCTCACTTTCCGGGGACGAAGTTGGTGGCATAGGCCCAATGGGTCGAAGCTGCCACCTGGGTAGATTGGGTCAGTGA
CCTCACCGAGGGGGCCACCAGCAATACGGTAACCTTCAACGGCACCCATTAGGATAACTTGTGTGGCCCAGATGGCGAGGATGCTCTGGGCGTGGATCAG
GCTTGGGTTGCCCAAGTAGTCGAGCCCACCCTCGCTGAAGATCTGGGACCCGGCCTTGAACCACACGGCTTCTCCGAACTTCACCCCGTTGCGGGACAGC
AACTCCGGGAAGACGCAGCCCAAGGCTCCGAGCATGGCCCACCTGGAGTGGATCACTTCGAGTTCACGGTTCTTGGCGAAGGTTTCTGGGTCTGCGGAAA
GCCCAGCAGTGTCCCAGCCGTAGTCGCCTGGGAACTCACCGGTTAGGTAGGACGGGGGCTCGCCAGAGAATGGGCCCAAGTACTTGACTCGGTCTGGGCC
GTACCATGGGCTTCCTGAGGAGACCTGCTTGGTGACGGTCTTCCTCATGCTCACCCTTCCCACTTCTGGGGCTGATGGGCCCAGCTTCACGGCCTTGCCA
GCCAAGGATGGGGATGAGAGAGCCATGGAAGAAGCTGCTGCCATTTTTTAACTCAAGGATGAGCTTTGCTTTGTGCTTTGTGTTATGAGTGTTTTG