Detailed information on CNT30621216


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 3e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641294Cajanus cajanNymphaea colorata45.3534.1686.71346forward
CNT30534636Cajanus cajanEucalyptus grandis62.2543.1485.68475forward
CNT30524978Cajanus cajanPhaseolus vulgaris62.1260.8590.3474forward
CNT30629263Cajanus cajanVigna unguiculata61.7345.7790.23471forward
CNT30709062Cajanus cajanGlycine max60.0356.8289.08458forward
CNT30587514Cajanus cajanMusa acuminata40.537.1486.73309forward
CNT30129909Cajanus cajanCorymbia citriodora49.2851.7289.63376forward
CNT30362790Cajanus cajanSorghum bicolor51.7743.9489.11395forward
CNT30117579Cajanus cajanOryza nivara42.250.1688.51322forward
CNT30176337Cajanus cajanVigna angularis28.4421.494.47217forward

Expression of CNT30621216

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGRRGPLRKQPLFISRVSFVEDSLGVVNCFV*

>peptide 2 (40 aa)
METLPTSWVDGESLTAFPASDGEERAIEEAAIVYFKSELC*

>peptide 3 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 4 (30 aa)
LCNEVRDREKKWRVEFCKKQVTLSWIGYTR*

Sequence

>CNT30621216
AATTGTGTAACGAAGTGCGAGATAGGGAGAAAAAGTGGAGAGTTGAATTTTGTAAAAAGCAAGTAACATTGAGTTGGATTGGATACACAAGATAATTCAC
ATTATCTGAAGTACATTGCAATAACATATACTTCACGAAACACAAATCTAAAACTCAAACATTTCACTTTCCGGGGACGAAGTTGGTGGCGTAGGCCCAG
GCGTTGTTGTTGACTGGGTCAGAGAGGTGGTCAGCGAGGATGCTCTGGGCGTGGATGAGGCTTGGGTTGCCCAAGTAGTCGAGCCCACCCTCGCTGAAGA
TCTGGGAGCCGGCCTTGAACCACACGGCCTCGCCGAATTTCACGCCGTTGCGGGCCAAGAGCTCGGGGAAGACGCAGCCCAAAGCTCCCAGCATGGCCCA
CCTGGAGTGGATGACCTCAAGCTCACGGTTCCTGGCGAAGGTCTCGGGGTCAGCGGAAAGCCCGGCGGTGTCCCAGCCGTAGTCACCGGGGAACTCGCCG
GTCAGGTAGGACGGGGGCTCGCCGGAGAATGGGCCCAAGTACTTGACGCGGTCTGGGCCGTACCATGGGCTTCCGGAGGAGGCCTGCTTGGTGACGGTCT
TCCTCATGGAGACTCTCCCGACTTCTTGGGTCGATGGGGAGAGCTTGACCGCCTTTCCGGCCAGCGATGGGGAGGAGAGGGCCATTGAGGAAGCAGCCAT
TGTTTATTTCAAGAGTGAGCTTTGTTGAGGACTCTTTGGGTGTTGTGAATTGCTTTGTGTAGT