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Detailed information on CNT30534609


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 2e-179

BLAST vs NONCODE:
NONBNAT005173, E-value = 2e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524978Eucalyptus grandisPhaseolus vulgaris45.3763.5486.06495forward
CNT30629263Eucalyptus grandisVigna unguiculata57.0160.4586.17622forward
CNT30504491Eucalyptus grandisNicotiana attenuata60.4969.6283.33660forward
CNT3046618Eucalyptus grandisPrunus dulcis54.8171.5383.11598forward
CNT3088186Eucalyptus grandisVigna radiata64.2564.3185.73701forward
CNT30621493Eucalyptus grandisCajanus cajan61.3249.8582.51669forward
CNT30153357Eucalyptus grandisPrunus persica54.8133.8683.11598forward

Expression of CNT30534609

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MEILPLPRSSGVEGESFTACPARDGEERAMVEAAIVEWI*

>peptide 2 (30 aa)
DQDRLDHRKLWRTRFADKSMKVKWQIMKEN*

>peptide 3 (46 aa)
MPLRARSSGKTHPRAPSMAHLQWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 4 (43 aa)
MACTKNPNMENMASLPFLISFTLSSAKASGSSARPKGSKLPPG*

>peptide 5 (71 aa)
MGLGTWRGLDHTMGSQRRLACGRPSSWRFSHCREAREWRGRASPPVQPGMERREPWWKPPLLSGFESLTSV*

Sequence

>CNT30534609
AAGATCAAGATCGCTTGGACCATAGAAAGCTTTGGAGGACAAGGTTTGCAGATAAATCTATGAAGGTTAAGTGGCAAATAATGAAGGAAAACTAGGGAAC
AAACGTGGGAGTCGAGTCGAAAAAGGAAGGAAGATGATTGAAGATGTCACTCAAGAGTCAAGCCAGCGGCAATACATGTAATTTACACTTCTGAAAGTAT
CGTTTCCAACCGAACTGTATATCACCCCTCACGCTCACTTTCCAGGGACGAAGTTGGTGGCATAGGCCCAAGCATTGTTGTTAACTGGATCAGCAAGGTG
GTCAGCCAAGTTCTCCAATGGACCCTTTCCTGTCACAATGGCCTGCACGAAGAACCCAAACATGGAGAACATGGCAAGCCTGCCGTTCTTGATCTCCTTC
ACCTTGAGCTCGGCAAAGGCCTCAGGGTCATCGGCCAGGCCCAAGGGGTCGAAGCTCCCCCCGGGGTAGAGCGGGTCGGTGACCTCACCGAGCGGGCCAC
CAGCAATACGGTAACCCTCGACGGCTCCCATCAGGATGACTTGGCAGGCCCAGATGGCCAAGATGCTTTGGGCGTGGATCAGGTTGGGGTTGCCCAGGTA
GTCGAGCCCTCCCTCGCTAAAGATCTGGGCGCCAGCCTTGAACCACACGGCCTCACCGAACTTGATGCCGTTGCGGGCCAGGAGCTCGGGGAAGACGCAC
CCCAGGGCACCGAGCATGGCCCACCTGCAGTGGATGACTTCAAGCTCGCGGTTCTTGGCGAAGGTCTCAGGGTCGGCCGAGAGCCCAGCAGTGTCCCAAC
CGTAGTCACCGGGGAACTCACCAGTGAGGTAGCTCGGGGGCTCACCGGAGAATGGGCCTAGGTACTTGGCGCGGTCTGGACCATACCATGGGCTCCCAGA
GGAGACTGGCTTGCGGACGGCCTTCCTCATGGAGATTCTCCCATTGCCGAGAAGCTCGGGAGTGGAGGGGGAGAGCTTCACCGCCTGTCCAGCCAGGGAT
GGAGAGGAGAGAGCCATGGTGGAAGCCGCCATTGTTGAGTGGATTTGAGAGCTTGACCTCTGTCTAGTGTTGAAATAGAGAGTTGAGATGG