Detailed information on CNT30359252


BLAST search results

BLAST vs Swiss-Prot:
sp|P27492|CB21_TOBAC, E-value = 2e-122

BLAST vs NONCODE:
NONSTUT001352, E-value = 8e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524978Lactuca sativaPhaseolus vulgaris43.4951.4884.79401forward
CNT3046617Lactuca sativaPrunus dulcis42.5257.0685.2392forward
CNT30217700Lactuca sativaKalanchoe fedtschenkoi41.3248.2984.78381forward
CNT30623259Lactuca sativaDaucus carota42.9562.5687.37396forward
CNT30705055Lactuca sativaPrunus avium39.2657.2885.08362forward

Expression of CNT30359252

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MSLDQQKVRRCPSRSHLGIHRSGMMEPRRRMGLGT*

>peptide 2 (45 aa)
METRPFPKSSELEGLVFTAWPAKGEERAMVEAAIVSFLKLETKNI*

>peptide 3 (42 aa)
MGYNPSPSGNLIHYQAFCVHPLLLLGYASTQKKHITVVTINN*

>peptide 4 (86 aa)
MDQTRVSQVIKPTFTEDLGSSLEPYSLTELHTITGQELREDAAKSSKHCPSAVDDLKLTVLGKCLWISRKSGGVPAVVTWEFTGQV*

>peptide 5 (50 aa)
MDFLMAQPSWQLQSSSWKPVHFRKAQNLRDLFSLLGLRKERREPWWKQPL*

Sequence

>CNT30359252
CAGGATTTCCTTATCGATAATTGAATTTTTTTAATGGGTTACAACCCGAGTCCAAGCGGAAACTTGATCCATTACCAGGCCTTTTGTGTGCATCCACTTC
TACTATTGGGGTATGCGTCTACACAAAAAAAACACATCACAGTTGTAACAATTAACAACTAATTGCTATTTTACCATGTGCACAAGATACCCAAAAATAG
CTATATATTAATTCACAAATCATTTTACATCAAAACCCTTATTTAGTACATTCACTTTCCGGGGACAAAGTTTGTAGCATAAGACCAGGCGTTATTTGCA
ACAGGGTCAGCAAGTGGGTCAACAACCTCACCCAATGGTCCACCGGCAATTCTGTAGCCCTCAACAGCACCCATCAAGATGACTTGGGTGGCCCAGATAG
CCAAGATGCTCTGAGCATGGACCAAACTAGGGTTTCCCAAGTAATCAAGCCCACCTTCACTGAAGATCTGGGATCCAGCCTTGAACCATACAGCCTCACC
GAACTTCACACCATTACGGGCCAAGAGCTCAGGGAAGACGCAGCCAAGAGCTCCAAGCATTGCCCATCTGCAGTGGATGACCTCAAGCTCACGGTTCTTG
GAAAATGTCTCTGGATCAGCAGAAAGTCCGGCGGTGTCCCAGCCGTAGTCACCTGGGAATTCACCGGTCAGGTATGATGGAGCCTCGCCGGAGAATGGGC
CTAGGTACTTGACACGGTCAGGGCCGTACCATGGACTTCCTGATGGCGCAGCCTTCTTGGCAGCTGCAGTCTTCCTCATGGAAACCCGTCCATTTCCGAA
AAGCTCAGAACTTGAGGGACTTGTTTTCACTGCTTGGCCTGCGAAAGGAGAGGAGAGAGCCATGGTGGAAGCAGCCATTGTAAGTTTTCTTAAATTAGAA
ACTAAAAATATTTAGAAAGTTG