Detailed information on CNT30176338


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 2e-85

BLAST vs NONCODE:
NONBNAT007398, E-value = 2e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524978Vigna angularisPhaseolus vulgaris36.7142.7597.3333forward
CNT30562275Vigna angularisActinidia chinensis44.4347.2581.89403forward
CNT30589999Vigna angularisMusa acuminata41.5769.9483.29377forward
CNT30543163Vigna angularisBrassica napus28.4553.3185.66258forward
CNT30235793Vigna angularisBrassica oleracea28.4544.5685.66258forward
CNT30171121Vigna angularisTrifolium pratense43.7745.2283.38397forward
CNT3012577Vigna angularisZea mays38.9261.9386.4353forward
CNT30359320Vigna angularisLactuca sativa43.8849.6981.91398forward

Expression of CNT30176338

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAHLEWMTSNSRFLAKVSGTGARRRMGPST*

>peptide 2 (30 aa)
NYDLKHVSFTGIKESKFKLVATREEKKNVK*

>peptide 3 (29 aa)
MRVPWRKQQPLFQRTFLFLCALCFEVWEL*

>peptide 4 (46 aa)
MLTLPTSGADGASLTALPAKEGDESAMEEAAAIVPKNFPFSLCSVL*

Sequence

>CNT30176338
AATTATGACCTCAAACATGTTTCTTTTACCGGAATTAAGGAATCGAAGTTCAAATTGGTGGCGACAAGAGAAGAGAAAAAAAACGTAAAATAGAGGAGAA
GATGGAAATTTGTAAAAAGCAAGTAACATTAAGTTGGATCGGATACACAAGATGATTCACATTATCTGAAGTACATTGCAATAACATATACTTCAACAAA
CAGAAATCTAAAACTCTCGAGGGCACAAATCATTCTGTTGACGCTCACTTTCCGGGGACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTGACTGGGT
CAGCAAGGTGGTCAGCGAGACCCAATGGGTCGAAGCTGCCACCGGGGTAAATGGGGTCAGTGACCTCACCGAGAGGCCCACCGGCAATACGGTAACCCTC
AACGGCGCCCATGAGGATGACTTGGGTGGCCCAGATGGCGAGGATGCTCTGAGCGTGGATGAGGCTTGGGTTGCCCAAGTAGTCGAGCCCACCCTCGCTG
AAGATCTGGGAACCAGCTTTGAACCACACGGCCTCGCCGAATTTCACGCCGTTGCGGGACAAGAGTTCGGGGAAGACGCAGCCCAAGGCTCCGAGCATGG
CCCACCTGGAGTGGATGACTTCCAACTCACGGTTCCTGGCGAAGGTCTCTGGGACGGGGGCTCGCCGGAGAATGGGCCCAAGTACTTGACACGGTCTGGG
CCGTACCATGGGCTTCCGGAGGAAACCTGCTTGGTGACGGTCTTCCTCATGCTGACCCTCCCGACTTCGGGGGCTGATGGGGCAAGCTTGACGGCCTTGC
CAGCCAAGGAGGGGGATGAGAGTGCCATGGAGGAAGCAGCAGCCATTGTTCCAAAGAACTTTCCTTTTTCTTTGTGCTCTGTGCTTTGAGGTGTGGGAGT
TGTGAAT