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Detailed information on CNT30145222


BLAST search results

BLAST vs Swiss-Prot:
sp|P07371|CB22_PEA, E-value = 6e-122

BLAST vs NONCODE:
NONBNAT005173, E-value = 1e-38

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524978Medicago truncatulaPhaseolus vulgaris60.351.8685.15404forward
CNT30200969Medicago truncatulaPisum sativum42.2456.3789.75283forward
CNT30709739Medicago truncatulaGlycine max6042.2785.32402forward
CNT3046617Medicago truncatulaPrunus dulcis57.3155.983.33384forward
CNT30234656Medicago truncatulaBrassica oleracea57.3170.0780.99384forward
CNT30171121Medicago truncatulaTrifolium pratense40.330.7592.22270forward
CNT30217700Medicago truncatulaKalanchoe fedtschenkoi57.3148.6784.64384forward
CNT30705055Medicago truncatulaPrunus avium57.3160.7683.85384forward
CNT3055205Medicago truncatulaAmborella trichopoda5037.982.39335forward
CNT30725369Medicago truncatulaLupinus angustifolius6040.286.82402forward

Expression of CNT30145222

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MSLGQQKVQQCPIRSHLGTLQSSKTGAHQRMGLST*

>peptide 2 (36 aa)
MVNLAAPNSWLEGVSLTGLPAKVGEERAMDDAAILQ*

>peptide 3 (36 aa)
PQEERYKKVYITKNIMTIHFPGTKLQYGNLQQRPSR*

>peptide 4 (95 aa)
MDQTWVTQVVKSTLAKDLGSGLEPYSLTEFNTIARQKLWENTSQGSQHSPPTMDDFKFTVLGECLWVSRKSSSVPSVVTWELSSQVRRGLTREWA*

Sequence

>CNT30145222
CCCGCAGGAAGAACGTTACAAGAAAGTATACATAACAAAAAACATAATGACCATTCACTTTCCGGGAACAAAGTTGCAATACGGTAACCTTCAACAGCGC
CCATCAAGATAACTTGGGTAGCCCAGATGGCAAGAATGCTCTGAGCATGGACCAAACTTGGGTTACCCAAGTAGTCAAGTCCACCCTCGCTAAAGATCTG
GGATCCGGCCTTGAACCATACAGCCTCACCGAATTTAACACCATTGCGAGACAAAAGCTCTGGGAAAACACATCCCAAGGCTCCCAACATAGCCCACCTA
CTATGGATGACTTCAAGTTCACGGTTCTTGGCGAATGTCTCTGGGTCAGCAGAAAGTCCAGCAGTGTCCCATCCGTAGTCACCTGGGAACTCTCCAGTCA
AGTAAGACGGGGGCTCACCAGAGAATGGGCCTAAGTACTTAACACGGTCTGGGCCGTACCATGGGCTTCCTGAGGAGGCTACTTTCTTGGTGGTAGCAGC
CTTCCTCATGGTGAACCTTGCAGCTCCCAATTCTTGGCTTGAAGGGGTTAGCTTGACTGGCTTGCCAGCCAAGGTTGGTGAAGAGAGAGCCATGGATGAT
GCGGCCATTTTGCAATGAAATTAAAATGCTTGTTGTGCTTTTGATAAATGTACTCGTATGAATGGTGATT