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Detailed information on CNT30234656


BLAST search results

BLAST vs Swiss-Prot:
sp|P13851|CB21_SINAL, E-value = 2e-122

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524978Brassica oleraceaPhaseolus vulgaris67.1547.2484.51368forward
CNT3046617Brassica oleraceaPrunus dulcis72.4557.7981.61397forward
CNT30145222Brassica oleraceaMedicago truncatula70.0757.3180.99384forward
CNT30153531Brassica oleraceaPrunus persica72.4560.2481.86397forward
CNT30705057Brassica oleraceaPrunus avium65.5143.4181.62359forward

Expression of CNT30234656

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLQWITSSSRFLAKVSGSAERPAVSHP*

>peptide 2 (33 aa)
MVTRPVPKTSEAPGESFTAFPAKAAIRNFLDLF*

Sequence

>CNT30234656
CCGGCGACTCTGTAACCTTCAACAGCTCCCATGAGGATCACCTGAGTAGCCCAAATGGCTAAGATGCTCTGTGCGTGGACCAAGCTCGGGTTTCCCAAGT
AGTCGAGCCCTCCTTCGCTGAAGATCTGTGAACCAGCCTTGAACCAAACAGCTTCTCCGAACTTCACTCCGTTCCTAGCCAAAAGTTCAGGGAAAACACA
GCCTAGGGCTCCAAGCATGGCCCATCTGCAGTGGATAACTTCTAGCTCACGGTTCCTGGCGAAGGTCTCGGGGTCAGCGGAAAGACCGGCGGTGTCCCAT
CCGTAGTCACCGGGGAACTCTCCTGTGAGGTAGCTTGGGGGCTCTCCGGAGAATGGACCCAAGTACTTGACCCTGTCGGATCCGTACCATGGGCTGCCAG
ATGGACCGGTGGGTTTGACGGTTTTTCTCATGGTGACACGGCCGGTTCCAAAGACCTCTGAGGCTCCCGGTGAGAGCTTCACGGCCTTTCCGGCAAAGGC
AGCCATTAGAAATTTTCTTGATCTTTTTTAGTTTTTGTGTTTTTTTTT