Detailed information on CNT30708109


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LI74|CHUP1_ARATH, E-value = 5e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525281Glycine maxPhaseolus vulgaris60.4145.3392.91296forward
CNT3043735Glycine maxPrunus dulcis28.7838.5281.56141forward
CNT3087893Glycine maxVigna radiata52.4559.0889.88257forward
CNT30145936Glycine maxMedicago truncatula58.5744.0283.97287forward
CNT30621275Glycine maxCajanus cajan51.8480.1396.85254forward

Expression of CNT30708109

Peptides detected in this lncRNA

>peptide 1 (34 aa)
SISPIMLLLASDALLAEVTNSDEVSFFASLFINV*

>peptide 2 (37 aa)
MFKPELSPNLSTLAFSAFSLSCFSLAKANLWRSLYAGY

>peptide 3 (44 aa)
MKYPSLPPFSSMFDKIQLAVELGELCHRPFHLLIGFLGEEVGEV*

Sequence

>CNT30708109
CTCAATTTCACCAATCATGTTGCTCCTAGCATCAGATGCATTACTTGCAGAAGTAACTAATAGTGATGAAGTATCCTTCTTTGCCTCCCTTTTCATCAAT
GTTTGATAAAATTCAACTAGCTGTGGAGCTCGGTGAACTTTGTCACCGTCCATTCCACCTCTTGATAGGCTTCCTGGGGGAGGAGGTGGGGGAGGTCTAG
GCACCCTAGTAGGCCTTTTCTCAATGTGAGCAAGCTTCATCTTGCTAATGGTTTGATTATCAACATTCTTTCCATCATCAGATTGATCATTTGGAGTGCC
AGAAACAACTGGTTTCTCCTTTATTTGAGTAAGCTTTGGTGGCAAAGATATAGGACTCCCTCTTTCAGCCTTGGTCATGTTCAAACCTGAATTGTCACCA
AACCTCAGCACTCTTGCTTTCTCAGCCTTTTCTTTAAGTTGTTTTTCCCTTGCCAAGGCCAATTTGTGGCGATCTTTATACGCAGGATAC