Detailed information on CNT30319471


BLAST search results

BLAST vs Swiss-Prot:
sp|P26320|PSBO_SOLTU, E-value = 9e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535986Asparagus officinalisEucalyptus grandis24.8310.1187.8474forward
CNT30515294Asparagus officinalisJuglans regia39.2617.2382.91117forward
CNT30710612Asparagus officinalisGlycine max49.6614.3484.46148forward
CNT30289897Asparagus officinalisTriticum aestivum72.4836.1280.56216forward
CNT30592119Asparagus officinalisMusa acuminata25.178.3189.3375forward
CNT30147114Asparagus officinalisMedicago truncatula23.153.8985.5169forward
CNT30242448Asparagus officinalisAvena sativa28.5215.9588.2485forward
CNT30612678Asparagus officinalisArabis alpina16.7820.589050forward
CNT309111Asparagus officinalisZea mays40.9416.6287.7122forward
CNT30607994Asparagus officinalisGossypium raimondii29.8710.2585.3989forward
CNT30621504Asparagus officinalisCajanus cajan28.865.4683.7286forward
CNT30357143Asparagus officinalisLactuca sativa24.8310.2690.5474forward
CNT30408540Asparagus officinalisPapaver somniferum23.1516.286.9669forward
CNT30725886Asparagus officinalisLupinus angustifolius32.894.2882.6598forward

Expression of CNT30319471

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MSFVGWNSGGEFLAMPSALTVKEVKVSEPPSMVGHWLAVPVPLTSM*

>peptide 2 (82 aa)
LLEFHGSVGGDLEGALDLVEGVGEAGHEFCGLELGRGVLGDALGLDGEGGEGVGAAVDGRALVGGAGSFDFHVGFALDLVVG*

Sequence

>CNT30319471
TCTCCTCGAATTTCACGGCTCCGTCGGAGGAGACCTCGAAGGGGCCCTCGATCTCGTCGAGGGTGTAGGTGAGGCGGGTCATGAGTTTTGTGGGTTGGAA
CTCGGGAGGGGAGTTCTTGGCGATGCCCTCGGCCTTGACGGTGAAGGAGGTGAAGGTGTCGGAGCCGCCGTCGATGGTCGGGCATTGGTTGGCGGTGCCG
GTTCCTTTGACTTCCATGTAGGTTTTGCTTTGGATCTCGTCGTAGGTTAGGCGTTTTGGCACGCCCTCGGCGTTGGCTCCCTGTCGCATAAATGGAAA