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Detailed information on CNT30289897


BLAST search results

BLAST vs Swiss-Prot:
sp|P27665|PSBO_WHEAT, E-value = 4e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515312Triticum aestivumJuglans regia25.089.5980.67150forward
CNT30221336Triticum aestivumHordeum vulgare49.6742.9898.32297forward
CNT30436397Triticum aestivumAegilops tauschii99.6799.8399.5596forward
CNT30207216Triticum aestivumHelianthus annuus26.4228.9980.38158forward
CNT30319471Triticum aestivumAsparagus officinalis36.1272.4880.56216forward

Expression of CNT30289897

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSLVFWKAGGSFFWMPSALTVKESTPPSMVGHWFAVPVPFTSM*

Sequence

>CNT30289897
GTGAACATTCATGGGGGATCAATATCATGAGTAGGCGAGGAAGAAACAATAACAGAAGCTAAAATATAAACCGACACCCTGGGTTTAGATTACTAGATAC
ACACACAAACACACATTGTTGCCTCGATTGTTTCCTCTCCACCGATCAACCCACGTACGCATGCACACAAGATGAGTATCTTCACTTCTGCTCTGCTCTA
GTTAGACTCGAGCTGCGCGTACCACACACCCTGGATCTTGACATCCTTGGGCGCCTTGGCGCCGAGGTCGGGCACGCGCTCGCCTCCGGGGAGCTGCACG
GTGACGGCCGCGTAGTCGATGCCGTCCTTCTCCTCGAACTTGAGGGTGCCGTCGGCGCCGACCTCGAGCGGGCCTTCCATCTCGTCAAGGGTGTAGGTGA
GACGGGTCATGAGCTTGGTCTTCTGGAAGGCCGGCGGCTCGTTCTTCTGGATGCCCTCGGCCTTGACGGTGAAGGAGTCGACGCCGCCGTCGATGGTCGG
GCACTGGTTCGCGGTGCCGGTACCCTTCACCTCCATGTAGGTCTTGCTCTGGATCTCGTCGAAGGTCAGCCTCTTGGGCGCCCCCTCCGCGCTCGCGC