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Detailed information on CNT30641326


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 1e-163

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696247Nymphaea colorataOryza sativa55.4257.6486.43619forward
CNT30534250Nymphaea colorataEucalyptus grandis50.7651.9785.71567forward
CNT30316082Nymphaea colorataCorylus avellana54.3463.8383.36607forward
CNT30616124Nymphaea colorataSesamum indicum53.852.6782.86601forward
CNT30728214Nymphaea colorataCorchorus capsularis38.5951.1985.38431forward
CNT30629263Nymphaea colorataVigna unguiculata56.461.2284.76630forward
CNT30709739Nymphaea colorataGlycine max48.8857.4183.33546forward
CNT30188246Nymphaea colorataSecale cereale46.248.7387.21516forward
CNT30285424Nymphaea colorataTriticum aestivum43.1567.787.97482forward
CNT30383589Nymphaea colorataTriticum turgidum47.3669.5184.88529forward
CNT3088186Nymphaea colorataVigna radiata54.3455.6984.68607forward
CNT30555049Nymphaea colorataOryza glaberrima55.4252.5586.59619forward
CNT30455809Nymphaea colorataSaccharum spontaneum45.6646.8387.06510forward
CNT30345520Nymphaea colorataEragrostis tef46.1159.8186.99515forward
CNT30363150Nymphaea colorataSorghum bicolor55.651.3687.92621forward
CNT30369277Nymphaea colorataOryza glumipatula52.8260.5186.78590forward
CNT3055180Nymphaea colorataAmborella trichopoda55.4259.9282.55619forward
CNT30119285Nymphaea colorataCitrus clementina53.4566.7882.91597forward
CNT30103422Nymphaea colorataOryza rufipogon47.9941.3386.94536forward
CNT30575045Nymphaea colorataOryza barthii47.3656.0488.09529forward
CNT30497363Nymphaea colorataDigitaria exilis54.0751.3285.93604forward
CNT30117570Nymphaea colorataOryza nivara55.4259.2986.27619forward
CNT30604592Nymphaea colorataOryza punctata50.7656.8785.89567forward
CNT30556694Nymphaea colorataPanicum hallii46.1153.8788.16515forward
CNT3063784Nymphaea colorataSelaginella moellendorffii48.4347.1784.1541forward

Expression of CNT30641326

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MENMASLPFLSSFTLSSANASGSSARPSGSKLPPGYRGSVTSPSGPPAMRYPSTAPMRMTWQAQMAKMLCAWIRLGLPR*

>peptide 2 (38 aa)
MPRGRPRGQVGRSCHRGTGDLSPHRAVRRQCGTPQRHP*

>peptide 3 (49 aa)
MVTRPSPSISEAAEGVSLTAFPARVGEDRAMVAIACSLFSDFSSAKVCG*

>peptide 4 (68 aa)
MDQAGVAEVVEPSLAEDLSSGLEPHGLTELDAVPGEQLGEDAAECAQHSPPSVDHLQLPVLGEGLGVG*

Sequence

>CNT30641326
TAGAGTCTGTAAATCTGTCACATGAATCCACATGTTGAAGAAGGTAGGTGCCTGTAAAAACACACACACACAAAGAGACCTTGAGAGAGGGAGAGACAGA
GAGAGACTTGGACAATGAATATCTCTTGATTAATTGGAAAAGGTTCTCACACTAACATGACACAAACTCTTAATCCTTCCATTTCATGTACAAACCACCA
GATCAAACGCCCCCACATAGATGATCATGACTCTTTTTAACTCATTCACTCAATCCTAGTCTGAACTCTTCATCCGTCCATCACAGTCGGAGAAAGGCCT
CACTTGCCGGGGACGAAGTTGGTGGTCGGCAAGGTTCTCGAGAGGTCCCTTGCCGGTGACGATGGCCTGAACGAAGAACCCGAACATGGAGAACATGGCC
AGCCTGCCATTCTTGAGTTCCTTCACCTTAAGCTCGGCGAATGCCTCGGGGTCGTCCGCGAGGCCAAGTGGGTCGAAGCTGCCACCGGGGTACAGGGGAT
CTGTCACCTCACCGAGCGGTCCGCCGGCAATGCGGTACCCCTCAACGGCACCCATGAGAATGACCTGGCAGGCCCAGATGGCCAAGATGCTCTGTGCATG
GATCAGGCTGGGGTTGCCGAGGTAGTCGAGCCCTCCCTCGCTGAAGATCTGAGCTCCGGCCTTGAACCACACGGCCTCACCGAACTTGACGCCGTTCCTG
GCGAGCAGCTCGGGGAAGACGCAGCCGAGTGCGCCCAACATAGCCCACCTAGCGTGGATCACCTCCAGCTCCCTGTTCTTGGCGAAGGTCTCGGGGTCGG
CTGAGAGCCCAGCGGTGTCCCAGCCGTAGTCACCGGGGAACTCACCGGTAAGGTAGGATGGGGGCTCGCCGGACAAGGGGCCGAGGTATTTGACACGGTC
TGGGCCGTACCAGGGGCTGCCGGAGGAGGCCACCCTGGTGGGCTTGGAGACGCTCTTCCTCATGGTGACGCGCCCATCACCGAGCATCTCTGAGGCGGCA
GAGGGGGTCAGCTTGACCGCCTTTCCGGCCAGAGTTGGGGAAGACAGAGCCATGGTTGCCATTGCTTGCTCTCTCTTCTCAGATTTCTCTTCTGCAAAGG
TGTGTGGGTGAGTGAGT