Detailed information on CNT30683966


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522288Triticum urartuSetaria italica20.049.6589.81108forward
CNT30185854Triticum urartuSecale cereale74.2151.7593400forward
CNT30295069Triticum urartuTriticum aestivum75.8849.16100409forward
CNT30223727Triticum urartuHordeum vulgare30.6130.6191.52165forward
CNT30390919Triticum urartuTriticum turgidum75.8865.44100409forward
CNT30439030Triticum urartuAegilops tauschii42.4963.7989.52229forward
CNT30662943Triticum urartuTriticum dicoccoides75.8867.9499.76409forward
CNT30142872Triticum urartuLolium perenne22.2616.1789.17120forward
CNT30721395Triticum urartuTriticum spelta65.8673.96100355forward
CNT30352513Triticum urartuEragrostis tef21.159.6687.72114forward
CNT30579664Triticum urartuEchinochloa crusgalli20.0410.3887.04108forward

Expression of CNT30683966

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MQRAYRAKKIKLQALVDSSTKLKTNHMQPRTATYATQD*

Sequence

>CNT30683966
AAAAAAAAGGAAAACTTGCTCTGAGGCTGTTATTGTCTTTACCATAGGTGGTTAAACATTGAGAAGACCACACCACACACACGAGAGAATTTACACACGC
ACGGAGCTTACACAGAGCACACACATACACCCATCACTCGCTAGCATGCAGCGAGCATACCGAGCCAAGAAAATAAAGTTACAAGCACTAGTAGACAGTA
GTACGAAGCTGAAGACAAACCACATGCAGCCTCGGACAGCAACGTACGCTACGCAGGATTAGATAACCAAAAGAGCAGCAAACATGGCGGCGTCGCACAA
GTTGTTGAGCACCCTGCCTTCAGTTCTCTGGCCGACGGCTCTTATTTAGCGGTGGTTGCTCCCGGGGTGGAAAACGCTCCGCCACACGCTGCCGCCGCGC
GGCGGCGTGGACGACGACGGCGTCACCGGCGTGGTCGGGGTCGTCGGCATCGACGGCGACTGCTTAATCGCCTCCCCTGCAGCTGCACCTCCACCAACAT
CCATGTAAACCGCCGTCAGTTCACACAATAATAAACCCA