« Back to Triticum dicoccoides search


Detailed information on CNT30662943


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30185854Triticum dicoccoidesSecale cereale66.4551.7592.75400forward
CNT30295069Triticum dicoccoidesTriticum aestivum83.0660.199.6500forward
CNT30223727Triticum dicoccoidesHordeum vulgare27.4130.6191.52165forward
CNT30390919Triticum dicoccoidesTriticum turgidum83.068099.6500forward
CNT30439030Triticum dicoccoidesAegilops tauschii38.0463.7989.08229forward
CNT30683966Triticum dicoccoidesTriticum urartu67.9475.8899.76409forward
CNT30721395Triticum dicoccoidesTriticum spelta58.9773.9699.72355forward

Expression of CNT30662943

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MELTQSTHIHPSLASMQRAYRAKKIKLQALVDSSTKLKTNHMQPRTATYATQD*

>peptide 2 (37 aa)
YCLYHRWLNIEKTTPHTRENLHTHGAYTEHTHTPITR*

Sequence

>CNT30662943
GTTATTGTCTTTACCATAGGTGGTTAAACATTGAGAAGACCACACCACACACACGAGAGAATTTACACACGCATGGAGCTTACACAGAGCACACACATAC
ACCCATCACTCGCTAGCATGCAGCGAGCATACCGAGCCAAGAAAATAAAGTTACAGGCACTAGTAGACAGTAGTACGAAGCTGAAGACAAACCACATGCA
GCCTCGGACAGCAACGTACGCTACGCAGGATTAGATAACCAAAAGAGCAGCAAACATGGCGGCGTCGCACAAGTTGTTGAGCACCCTGCCTTCAGTTCTC
TGGCCGACGGCTCTTATTTAGCGGTGGTTGCTCCCGGGGTGGAAAACGCTCCGCCACACGCTGCCGCCGCGCGGCGGCGTGGACGACGACGGCGTCACCG
GCGTGGTCGGGGTCGTCGGCATCGACGGCGACTGCTTAATCGCCTCCCCTGCAGCTGCACCTCCACCAACATCCATGTAAACCGCCGTCAGTTCACACAA
TAATAAACCCAACAGATCCCCCGGTTAAGCATCAAATCTTCTTCTGAAAACTACTCGTGCTAGTTCTTACGTTCTTCTCAACAGTTTCAGGCCATGTCGG
TA