Detailed information on CNT30390919


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30295069Triticum turgidumTriticum aestivum82.7262.14100517forward
CNT30223727Triticum turgidumHordeum vulgare26.430.6191.52165forward
CNT30439030Triticum turgidumAegilops tauschii36.6463.7989.52229forward
CNT30662943Triticum turgidumTriticum dicoccoides8083.0699.6500forward
CNT30683966Triticum turgidumTriticum urartu65.4475.88100409forward
CNT30721395Triticum turgidumTriticum spelta56.873.96100355forward

Expression of CNT30390919

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MELTQSTHIHPSLASMQRAYRAKKIKLQALVDSSTKLKTNHMQPRTATYATQD*

>peptide 2 (39 aa)
GCYCLYHRWLNIEKTTPHTRENLHTHGAYTEHTHTPITR*

Sequence

>CNT30390919
GAGGCTGTTATTGTCTTTACCATAGGTGGTTAAACATTGAGAAGACCACACCACACACACGAGAGAATTTACACACGCATGGAGCTTACACAGAGCACAC
ACATACACCCATCACTCGCTAGCATGCAGCGAGCATACCGAGCCAAGAAAATAAAGTTACAAGCACTAGTAGACAGTAGTACGAAGCTGAAGACAAACCA
CATGCAGCCTCGGACAGCAACGTACGCTACGCAGGATTAGATAACCAAAAGAGCAGCAAACATGGCGGCGTCGCACAAGTTGTTGAGCACCCTGCCTTCA
GTTCTCTGGCCGACGGCTCTTATTTAGCGGTGGTTGCTCCCGGGGTGGAAAACGCTCCGCCACACGCTGCCGCCGCGCGGCGGCGTGGACGACGACGGCG
TCACCGGCGTGGTCGGGGTCGTCGGCATCGACGGCGACTGCTTAATCGCCTCCCCTGCAGCTGCACCTCCACCAACATCCATGTAAACCGCCGTCAGTTC
ACACAATAATAAACCCAACAGATCCTCCGGTTAAGCATCAAATCTTCTTCTGAAAACTACTCGTGCTAGTTCTTACGTTCTTCTCAACAGTTTCAGGCCA
TGTCGGTACCTCTGGACTAACGTAT