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Detailed information on CNT30641254


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 9e-138

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522168Nymphaea colorataSetaria italica50.5558.5584.71510forward
CNT30534267Nymphaea colorataEucalyptus grandis56.9957.0483.65575forward
CNT30709832Nymphaea colorataGlycine max56.9963.2682.96575forward
CNT30587514Nymphaea colorataMusa acuminata30.7237.2687.1310forward
CNT30440443Nymphaea colorataAegilops tauschii41.6365.3287.38420forward
CNT30664832Nymphaea colorataTriticum dicoccoides53.1258.986.75536forward
CNT3013606Nymphaea colorataZea mays49.1648.286.29496forward
CNT30129614Nymphaea colorataCorymbia citriodora33.9941.8888.34343forward
CNT30581184Nymphaea colorataEchinochloa crusgalli56.163.5287.28566forward
CNT30556492Nymphaea colorataPanicum hallii50.4555.5186.64509forward

Expression of CNT30641254

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MENMASLPFLSSFTLSSANASGSSARMTWQAQMAKMLCAWIRLGLPR*

>peptide 2 (68 aa)
MDQAGVAEVVEPSLAEDLSSGLEPHGLTELDAVPGEQLGEDAAECAQHSPPSVDHLQLPVLGEGLGVG*

Sequence

>CNT30641254
TTGATTGTGAATGCGCTTAGAGTCTGTAAATCTGTCACATGAATCCACATGTTGAAGAAGGTAGGTGCCTGTAAAAACACACACACACAAAGAGACCTTG
AGAGAGGGAGAGACAGAGAGAGACTTGGACAATGAATATCTCTTGATTAATTGGAAAAGGTTCTCACACTAACATGACACAAACTCTTAATCCTTCCATT
TCATGTACAAACCACCAGATCAAACGCCCCCACATAGATGATCATGACTCTTTTTAACTCATTCACTCAATCCTAGTCTGAACTCTTCATCCGTCCATCA
CAGTCGGAGAAAGGCCTCACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCAAGGTTCTCGAG
AGGTCCCTTGCCGGTGACGATGGCCTGAACGAAGAACCCGAACATGGAGAACATGGCCAGCCTGCCATTCTTGAGTTCCTTCACCTTAAGCTCGGCGAAT
GCCTCGGGGTCGTCCGCGAGAATGACCTGGCAGGCCCAGATGGCCAAGATGCTCTGTGCATGGATCAGGCTGGGGTTGCCGAGGTAGTCGAGCCCTCCCT
CGCTGAAGATCTGAGCTCCGGCCTTGAACCACACGGCCTCACCGAACTTGACGCCGTTCCTGGCGAGCAGCTCGGGGAAGACGCAGCCGAGTGCGCCCAA
CATAGCCCACCTAGCGTGGATCACCTCCAGCTCCCTGTTCTTGGCGAAGGTCTCGGGGTCGGCTGAGAGCCCAGCGGTGTCCCAGCCGTAGTCACCGGGG
AACTCACCGGTAAGGTAGGATGGGGGCTCGCCGGACAAGGGGCCGAGGTATTTGACACGGTCTGGGCCGTACCAGGGGCTGCCGGAGGAGGCGGCAGAGG
GGGTCAGCTTGACCGCCTTTCCGGCCAGAGTTGGGGAAGACAGAGCCATGGTTGCCATTGCTTGCTCTCTCTTCTCAGATTTCTCTTCTGCAAAGGTGTG
TGGGTGAGT