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Detailed information on CNT30664832


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 2e-139

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522354Triticum dicoccoidesSetaria italica53.7448.3288.34489forward
CNT30641254Triticum dicoccoidesNymphaea colorata58.953.1286.75536forward
CNT30534267Triticum dicoccoidesEucalyptus grandis57.6952.0886.86525forward
CNT30440443Triticum dicoccoidesAegilops tauschii69.4598.2997.63632forward
CNT3013606Triticum dicoccoidesZea mays59.6752.7793.19543forward
CNT30579870Triticum dicoccoidesEchinochloa crusgalli68.0262.2792.89619forward
CNT30556492Triticum dicoccoidesPanicum hallii60.9960.5294.95555forward

Expression of CNT30664832

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLPVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (51 aa)
MACTKKPNMENMARRPFLISFTLSSAKASGSSARPRGSKMLCACTRLGLPR*

>peptide 3 (29 aa)
MAQRQWMTSSSRFLAKVSGSADSPAVSQP*

Sequence

>CNT30664832
AGAGAGACAAGTAGTTAACCAGAAGACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAA
CTCCTCATCTCGACTCGCCCTCACATGCAACATCTACCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGC
AGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACGGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGA
CGGGGTCGGCGAGGTGGTCGGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCC
GTTCTTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCGGGGTCCTCGGCGAGGCCCAGGGGGTCGAAGATGCTCTGCGCGTGCACCAGGCTGGGGTTG
CCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGA
AGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGACAGCCCCGCGGT
GTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGG
CTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGG
CCATCGCCGG