« Back to Corymbia citriodora search


Detailed information on CNT30129614


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 2e-131

BLAST vs NONCODE:
NONBNAT007398, E-value = 1e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641254Corymbia citriodoraNymphaea colorata41.8833.9988.34343forward
CNT30131530Corymbia citriodoraLolium perenne33.8233.8291.7277forward

Expression of CNT30129614

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MACTKNPNMENMARRPFLISFTLSSANASGSSARMLWAWIRLGFPR*

>peptide 2 (29 aa)
MAHRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 3 (37 aa)
MRKQQESSQQKDPLVVRHKTPLTFRERSWWRRPRRCC*

Sequence

>CNT30129614
AGGCTATTCTCGGGTAGTAACGAGTAGTTTAGACATCCATCGGGCGGTGAGCAAAGGGCAAATTCCATAGCAGCAAGAGTAATAAAGCAATGAAAAAGGG
TAAGAACACGAAAGGATCACAATATTCTCAGCTCTCCATAAAGTAAATTTTGCAGTGAATTTACACAAAGATGAGGAAACAACAAGAATCGTCGCAACAA
AAAGACCCCCTCGTCGTCCGACATAAGACACCTCTCACTTTCCGGGAACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTAACGGGGTCGGCGAGGTG
GTCGGCGAGGTTCTCCAGCGGCCCCTTTCCGGTCACGATGGCCTGCACGAAGAACCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTC
ACCTTGAGCTCCGCGAATGCCTCCGGGTCGTCGGCGAGGATGCTCTGGGCGTGGATCAGGCTAGGGTTTCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGA
TCTGGGCGCCGGCCTTGAACCACACCGCCTCGCCGAACTTGACGCCGTTGCGGGCCAGGAGCTCCGGGAAGACGCAACCGAGGGCCCCGAGCATGGCCCA
CCGGCAGTGGATCACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCGGCCGAGAGCCCGGCGGTGTCCCACCCGTAGTCACCGGGGAACTCGCCG
GTCAGGTAGGACGGGGGCTCGCCGGAGAAGGGGCCGAGGTACTTGACGCGGTCGGGTCCGTACCAGGGGCTCCCGGAGGAGACGGGCTTGGTGACGGTCT
TCCTCATGGCGATCCTCCC