Detailed information on CNT30709832


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 2e-148

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641254Glycine maxNymphaea colorata63.2656.9982.96575forward
CNT30534267Glycine maxEucalyptus grandis65.2458.8384.65593forward
CNT30269346Glycine maxChenopodium quinoa61.3971.6381.18558forward
CNT30587514Glycine maxMusa acuminata33.7736.986.32307forward
CNT30237238Glycine maxBrassica oleracea61.6162.7184.11560forward
CNT30263105Glycine maxBrassica rapa45.5436.3285.27414forward
CNT30129909Glycine maxCorymbia citriodora64.9181.1684.24590forward
CNT3055205Glycine maxAmborella trichopoda61.0662.7883.6555forward
CNT30581184Glycine maxEchinochloa crusgalli59.9661.1785.5545forward

Expression of CNT30709832

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MANRPFLSSFTLSSAKASGITCVAQMARMLWAWIRLGLPK*

>peptide 2 (37 aa)
MGPASRPCQPRMGMREPWKKLLPFFNSRMSFALCFVL*

>peptide 3 (34 aa)
MLTLPTSGADGPSFTALPAKDGDERAMEEAAAIF*

>peptide 4 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30709832
GGCGTCAAAAGCTTAGAAGTATAAAATGAGAGAACAAATTGACACTTGAGTTTTGTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAAT
TCACATTATCTGAAGTACTTCACCAAACACAAATCTAAAAACTCTCAAAAGTCATTTCGTTCTTTGACGCTCACTTTCCGGGGACGAAGTTGGTGGCATA
GGCCCAGGCGTTGTTGTTGACAGGGTCAGCAAGGTGATCGGCGAGGTTCTCCAATGGACCCTTTCCGGTGACAATGGCCTGAACAAAGAAGCCAAACATA
GAGAACATGGCCAATCGTCCGTTCTTGAGTTCCTTCACCTTAAGCTCAGCAAAAGCCTCTGGGATAACTTGTGTGGCCCAGATGGCGAGGATGCTCTGGG
CGTGGATCAGGCTTGGGTTGCCCAAGTAGTCGAGCCCACCCTCGCTGAAGATCTGGGACCCGGCCTTGAACCACACGGCTTCTCCGAACTTCACCCCGTT
GCGGGACAGCAACTCCGGGAAGACGCAGCCCAAGGCTCCGAGCATGGCCCACCTGGAGTGGATCACTTCGAGTTCACGGTTCTTGGCGAAGGTTTCTGGG
TCTGCGGAAAGCCCAGCAGTGTCCCAGCCGTAGTCGCCTGGGAACTCACCGGTTAGGTAGGACGGGGGCTCGCCAGAGAATGGGCCCAAGTACTTGACTC
GGTCTGGGCCGTACCATGGGCTTCCTGAGGAGACCTGCTTGGTGACGGTCTTCCTCATGCTCACCCTTCCCACTTCTGGGGCTGATGGGCCCAGCTTCAC
GGCCTTGCCAGCCAAGGATGGGGATGAGAGAGCCATGGAAGAAGCTGCTGCCATTTTTTAACTCAAGGATGAGCTTTGCTTTGTGCTTTGTGTTATGAGT
GTTTTGAAG