Detailed information on CNT30219784


BLAST search results

BLAST vs Swiss-Prot:
sp|P58311|PSAA_WHEAT, E-value = 6e-108

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730522Hordeum vulgareCorchorus capsularis9765.2290.49452forward
CNT30202040Hordeum vulgarePisum sativum98.546.590.41459forward
CNT3086956Hordeum vulgareVigna radiata43.567.4188.67203forward
CNT30621618Hordeum vulgareCajanus cajan46.5745.490.78217forward
CNT30595862Hordeum vulgareOryza meridionalis99.5742.3795.04464forward

Expression of CNT30219784

Peptides detected in this lncRNA

>peptide 1 (32 aa)
VERLCDNGTNQQKALTLQKSMHQLQYNRVVIH*

>peptide 2 (30 aa)
MLAKAEKNLRLFGFLGNPHLHHHSLFLALL*

>peptide 3 (42 aa)
MKVHATQPKKDNGKLPEMSSKDFSRNLLQITSMTIEIVSIGM*

Sequence

>CNT30219784
GTGGAGCGGCTTTGTGATAATGGAACCAACCAGCAAAAAGCATTAACGCTGCAAAAATCAATGCACCAATTGCAGTACAATAGAGTTGTAATTCACTAGT
TATTCCAGATGCTCGCCAAAGCTGAAAAAAACCTTAGGTTATTTGGATTCCTCGGAAACCCCCACCTACATCACCATTCACTATTTCTTGCCCTACTATA
GGCCAAACTACCTGAGCACTGGGTCCAATGTGAGTAGGATCACTTAGCCATGCTTCATAATTGGAAAAACGGGCACCATGAAAGTACATGCCACTCAACC
AAAGAAAGATAATGGAAAGTTGCCCGAAATGAGCAGTAAAGACTTTTCTAGAAATCTCCTCCAAATCACCAGTATGACTATCGAAATCGTGAGCATCGGC
ATGTAGGTTCCAGATCCAAGTGGTAGTATCAGGGCCCTTAGCTAGTGTTCTTGAGAAATGGTCGGG