Detailed information on CNT3086956


BLAST search results

BLAST vs Swiss-Prot:
sp|A4GG97|PSAA_PHAVU, E-value = 6e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730522Vigna radiataCorchorus capsularis7.9231.3189.86217forward
CNT30202040Vigna radiataPisum sativum9.3425.9491.41256forward
CNT30219784Vigna radiataHordeum vulgare7.4143.5688.67203forward
CNT30621618Vigna radiataCajanus cajan9.3853.7794.16257forward
CNT30595862Vigna radiataOryza meridionalis8.9122.2886.48244forward

Expression of CNT3086956

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MAMEIGQVNHGSVGGEELGMQGKIWLGWSPVREVVCE*

>peptide 2 (35 aa)
MLSKSEKNQRLFVFLGISLHHHSIFLDPLLAGCHR*

>peptide 3 (29 aa)
MEVDDWLMVEVRGVESSLLSCDGEVFLLP*

>peptide 4 (31 aa)
MKVTHWLRCRGLWRRMEINLVLCPCVCFFVD*

>peptide 5 (31 aa)
MQGFMEKNGDKFGSLSLRVFLCRLNENGDWC*

>peptide 6 (57 aa)
MLNNCHNINSSPLLLEFVSLSLLLLFFLRSLVPFLRLYSFCWTLQVQESHAESEQWK*

>peptide 7 (40 aa)
MYDTALHRDFLARAAKTLFYCHCMRYFEHYCVNVAGGTSL*

>peptide 8 (64 aa)
MLQEGQASNVKPACYDILQLNSCLNKGNQSAVPLSFFSFFFIYFFVFVNVEHKKKIQLNKKKLT*

>peptide 9 (66 aa)
MQQAYMKIQVNKAYLLLEEPCQMVIQRRFYILEPSQFWSSFVIMKPTSKXHXGCKDQCTNCSTIEL*

>peptide 10 (98 aa)
MPPLPSDSHRAHPASLGGAGVIASVRPATAPPLSLSLYVSHSHPLSQHRRATTFRQALAVIGGSGHRKESYRRQGNSPLIRPFHSGTSSPPFNIQIGI*

>peptide 11 (30 aa)
MEVVVLMKIGLRLLIKGKKCGRRSQVEEGG*

Sequence

>CNT3086956
GATAAAGATGAAAATAAAGTATATAGTGAAATAATAAAATAAAAACCAATCAAATTAAATAAGAGAAGGGGGTGAAAAGGGAAAAAACAGGAGTGTGCAG
ACAAATTTTGCTTCTGATAGCAGATTGGGCCTAAGCCCAAGTGAAAAGGGGTGTGACCCAGCAATTGGAGAGGTACAGGGAGTAACGCCCGTTATCTTTT
TGTTATTTTTTATCGTGGCCCAGCAATGGCCTAGGCACCCCTCTCTCCCAAGGTCAGAAACCTTAGGGGTTCGAACCTCCTCACCCCATTCTGCACTCCA
ACACCTCTGAGACTCCAAGTCTCTCTCCGCACCTACTTGCCTAGGGTTGGGGTCATCTCCCCTGAACGCGTCATGCCGCCGCTCCCCTCTGACAGCCACC
GCGCCCATCCGGCCAGCCTTGGCGGCGCCGGCGTTATTGCTTCTGTCCGGCCAGCCACCGCGCCACCACTTTCTCTCTCCCTCTACGTATCGCACAGCCA
TCCACTGAGCCAACACCGCCGCGCGACCACGTTCCGCCAAGCTCTGGCCGTTATCGGTGGCTCCGGTCACCGCAAGGAATCCTACCGGCGTCAAGGCAAC
TCTCCCCTTATTCGCCCTTTTCATTCCGGGACATCCTCTCCTCCATTCAATATTCAAATCGGGATCTAGCAGTCACACCGCCGCCACTGCGCGTCCTCCG
TTCAACCACATTGCCGACCTCTGCATCCTCCTTCCTCTCCGAAACGCGAGCTCTTTTTGACTGGGCGCGGGTTTTTCCGATGGTGTAGGGAGTGTTGGGC
TATTGGCTTCGATTGACGCAGTCGAAAGGTGAAAGGAACACACTGTGGTGTTCCTGTGTGAATCTGTGTGAGTTGGGGAATGAAGGTGACACACTGGTTG
CGATGCAGGGGTTTATGGAGAAGAATGGAGATAAATTTGGTTCTCTGTCCTTGCGTGTGTTTCTTTGTAGATTGAATGAAAATGGAGACTGGTGTTGAGT
GGTTGATTCTTATTTTGTAACTTTTTGCAGTGCAGGTTGAGGATGATGGTTTTAAGCGTGAATGGAGTGGTTCTAGTGAAGACGAAGGGAAACGACATGT
AGTAGAAATCAAGGTTGATGGGGGGTTTGGTTGGGCCATTTCGGCTTTGGTAATGGAGATAGGAAAATGAAGAGAATGAGGGTGTTCTGTATGTTGTAGA
GTATGAAGATGAGATTATGGAAGTAGTTGTGTTGATGAAGATTGGGCTGAGATTATTAATAAAAGGCAAGAAATGCGGCCGGAGGTCTCAGGTTGAAGAG
GGAGGGTGATTATGCATTGGTGGATGAAAAAGGAGAGTACTCTCACAACAATTCAATCCCAAATAGAACAATATCATGTATAATATGAAGCACAATGCAG
CAAGCTTACATGAAGATACAAGTGAACAAAGCATACTTACTTCTTGAAGAGCCCTGTCAAATGGTGATTCAACGTAGATTCTACATCTTGGAACCAAGTC
AATTTTGGAGCAGCTTTGTGATAATGAAACCAACCAGCAAAAANCATNAAGGCTGCAAAGACCAATGCACCAATTGCAGTACAATAGAGTTGTAATTCAT
TAGTTATTCCAGATGCTCTCCAAATCTGAAAAAAATCAGAGGTTATTTGTATTCCTCGGAATCTCCCTACATCACCATTCAATATTTCTTGACCCACTAT
TGGCCGGTTGCCACCGTTAGCTCCTCTCTTCTTTTTACTGGCTTCGTTTTTCTTTTCCGTGGATGTTGAATAACTGCCACAATATCAATTCCTCTCCTCT
CTTGCTGGAGTTCGTTTCGTTGTCTTTGCTTCTTCTTTTTTTCTTGCGGTCTCTTGTTCCTTTTCTGAGATTGTATTCTTTTTGTTGGACTTTACAGGTG
CAAGAAAGTCATGCTGAGAGTGAGCAATGGAAGTAGATGATTGGTTAATGGTGGAGGTCAGAGGAGTCGAGAGCTCTCTTCTAAGCTGTGATGGTGAGGT
GTTCCTTCTCCCTTAAGGAGGATGGCAATGGAGATTGGTCAGGTGAATCATGGATCCGTTGGAGGTGAAGAATTGGGAATGCAAGGGAAAATCTGGTTGG
GGTGGTCACCGGTCAGAGAAGTAGTGTGTGAGTGAATGATAATGGTGCTTCTGAATCCCCTCTTCCCTTCTGTATGATCAGTCCGTATCCCTTCTGACTT
GGGATTTCTTTTGTCTTTTTTTCCTTGTTAATGGGATCAATCGGCGAAAACCGTTCAAATTTCCTTTCCCTTTGATGTATGACACAGCTTTGCATAGAGA
CTTTTTAGCAAGAGCAGCAAAGACGCTTTTTTACTGCCATTGTATGAGATATTTTGAGCATTACTGTGTAAATGTTGCAGGAGGGACAAGCCTCTAATGT
TAAGCCTGCCTGTTATGATATCTTGCAGCTGAATTCGTGCTTGAATAAAGGAAACCAGTCTGCTGTACCTCTTTCGTTTTTTTCCTTTTTTTTTATTTAT
TTTTTTGTTTTTGTTAACGTTGAACATAAAAAGAAGATACAACTAAACAAAAAGAAACTAACCTAAAAAAAGAATAAAGTGAGATAATTCTAAATAACAA
GTAAAGTAAAATAAAAAATAGAATTAAAATAAAAAATTAATATAAAAATAAAACTAAATAATATAAAATGAAATAAAAACAAAATAAAAATGATTAAAAG
ACATAAAATAAGATAAAATAAATTAAAGTAAAAAATATAT