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Detailed information on CNT30585620


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6L399|PSAB_SACHY, E-value = 0.0

BLAST vs NONCODE:
NONOSAT000261, E-value = 5e-95

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Echinochloa crusgalliOryza sativa42.939.5696.322201forward
CNT30678731Echinochloa crusgalliSetaria viridis6.5397.3895.52335forward
CNT30617597Echinochloa crusgalliSesamum indicum6.3330.1293.54325forward
CNT3021628Echinochloa crusgalliCitrullus lanatus2.6957.9896.38138forward
CNT30730522Echinochloa crusgalliCorchorus capsularis11.8587.7390.79608forward
CNT30526549Echinochloa crusgalliPhaseolus vulgaris12.7999.3984.3656forward
CNT30202037Echinochloa crusgalliPisum sativum41.7765.8688.382143forward
CNT30712408Echinochloa crusgalliGlycine max4.9191.385.32252forward
CNT30167792Echinochloa crusgalliPistacia vera5.2881.8788.56271forward
CNT3093534Echinochloa crusgalliSolanum tuberosum2.9437.1985.43151forward
CNT30194074Echinochloa crusgalliSecale cereale18.7110097.5960forward
CNT30289362Echinochloa crusgalliTriticum aestivum12.7558.0896.79654forward
CNT30219816Echinochloa crusgalliHordeum vulgare38.88100.195.741995forward
CNT30560220Echinochloa crusgalliActinidia chinensis14.6248.2391.87750forward
CNT30511784Echinochloa crusgalliSolanum lycopersicum6.7252.5192.75345forward
CNT3059930Echinochloa crusgalliArabidopsis lyrata5.2480.7888.48269forward
CNT301761Echinochloa crusgalliZea mays73.8166.8198.443787forward
CNT30232496Echinochloa crusgalliAnanas comosus2.8624.7995.24147forward
CNT30205718Echinochloa crusgalliHelianthus annuus338.1290.91154forward
CNT30713469Echinochloa crusgalliMalus domestica golden8.7389.689.51448forward
CNT30627902Echinochloa crusgalliDaucus carota10.2558.9788.21526forward
CNT30682212Echinochloa crusgalliTriticum urartu57.9290.1796.572972forward
CNT30368556Echinochloa crusgalliSorghum bicolor9.6199.297.97493forward
CNT30621618Echinochloa crusgalliCajanus cajan9.2499.1688.61474forward
CNT30595862Echinochloa crusgalliOryza meridionalis21.3410096.351095forward
CNT30369168Echinochloa crusgalliOryza glumipatula4.3561.196.41223forward
CNT30152144Echinochloa crusgalliPrunus persica3.7490.1489.06192forward
CNT30484006Echinochloa crusgalliChara braunii4.3361.1682.43222forward
CNT30430934Echinochloa crusgalliPapaver somniferum57.6745.2990.642959forward
CNT3057356Echinochloa crusgalliAmborella trichopoda39.0883.3386.732005forward
CNT3024232Echinochloa crusgalliPopulus trichocarpa2.9273.1788150forward
CNT30147977Echinochloa crusgalliBrachypodium distachyon12.2251.1895.53627forward
CNT30103614Echinochloa crusgalliOryza rufipogon13.5110096.97693forward
CNT30578211Echinochloa crusgalliOryza barthii2.9224.5191.33150forward
CNT30496729Echinochloa crusgalliDigitaria exilis19.84100.198.431018forward
CNT30115505Echinochloa crusgalliOryza nivara8.36100.791.38429forward
CNT30333024Echinochloa crusgalliCynara cardunculus19.3397.3587.5992forward

Expression of CNT30585620

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MLAKSEKTRRLFGFLGNPRLHHHSKFLALLLAKLPEHWVQYE*

>peptide 2 (42 aa)
MFPLAQARRKGSESQDLLYQVSDGNCEQIKHLSKVLIQSHGW*

>peptide 3 (39 aa)
MALSCKWALMSLQNIFKSMTNTPVGPIHMTSDQEKNSNS*

>peptide 4 (39 aa)
MIQNFLAKLHETDFRTSIERLLLTAQSEKQKCSDKDVPQ*

>peptide 5 (36 aa)
MCEQGKLCTIVSSEVWIRGHRVHMMSYNNSCRAQHS*

>peptide 6 (36 aa)
MIPGGYLTCSPSPRPVAREAKAKICFIRYQTGTASK*

>peptide 7 (33 aa)
MSRLNPLGKYRFDQDLLFWSTKSKHDVVMNIKA*

>peptide 8 (34 aa)
MSYYPLITYSTPNIRLHFPTEMENNYRNGIIHPE*

>peptide 9 (31 aa)
MPGSGPFLKRCFYRIPIHNNFNFWFRRTNNH*

Sequence

>CNT30585620
CCCGGTAACAAACATGCATAAACCATTTCTCGAAGTATGTGTCCGGATAGCCCAAAGTCTCGATAGTTAGCTCTAGGTCTTCCGGTTAAAAAACAACGTC
GATGAAGGCGTGTAGGTGCACTATTACGCGGTAGGGATTGCAATTTTTCTTGCATTTTTGTTTTTTCGCTCAAACTCAAAGGAGAAACTTTGCTTCTTAT
CTTTTTTTTTGAGGATCGACGAATAAAATGATATTTTTTTTCTAACTTCTGCCGCTTCTTCTCCCTCTGAATCAAACTTTTTTTTGCCATAATGTGCCGT
TCCTATTATTACCAAGTATATGGTTCTAATCCTAGATGGAAAAATAAATAGAAAAAAAATCTAAAAAGGCGGATCCTCCCTCTCCATCAAGAGTAATGAA
CTAGGTTCTGATACAGTACAAAAAACAAAAAAATAACTAAATTAACCAAACTTGCCTGATGTTGAGGCAATCAAGAAAGCTGCATAAGTGAATATATAAC
CCACGGAAAAGTGGGCTAAGCCAACCAATCTTGCTTGCACAATGGAAAGAGCCACGGGCTTATCTCTCCAGCGAATTAAATTAGCCAAAGGTGTGCGTTC
ATGAGCCCATGCTAAAGTCTCAATTAATTCCTGCCAATATCCACGCCAGGAAATTAAGAACATAAATCCAGTAGCCCAAACAAGATGTCCAAATAAGAAC
ATCCAAGCCCATACTGATAAACTATTCATCCCAAAAGGATTATATCCATTGATAAGTTGTGAAGAGTTTAACCATAGGTAATCTCTTAACCATCCCATCA
AATAAGTGGAGGATTCATTAAATTGTGAAACGTTGCCCTGCCATAATGTGATGTGTTTCCAATGCCAATAAAAAGTAACCCATCCAATGGTATTTAACAT
CCAGAAAACTGCCAAATAAAACGCGTCCCAAGCGGAAATATCACAAGTACCACCGCGCCCTGGGCCGTCGCAAGGAAAACTATATCCGAAATCCTTTTTA
TCCGGCATTAATTTGGAACCCCGTGCATCTAAAGCACCCTTTACTAAAATCAATGTAGTTGTATGCAAACCTAGAGCAATAGCATGATGAACCAAGAAAT
CTCCGGGTCCTATTGTTAAGAAAAGCGAATTACTATTCTCATTAACAGCATTCAACCATCCGGGCAACCATATGCTTCTACCTGCATTGAAAGCGGGGCC
ATTCGTTGAAGATAAGAGTATATCGAACCCATATGTCGTCTTACCATGAGCAGATTGAATCCATTGGGCAAATATAGGTTCGATCAAGATTTGCTTTTCT
GGAGTACCAAAAGCAAGCATGACGTCGTTATGAACATAAAGGCCTAAGGTATGGAATCCTAGGAAGAGGCTAGCCCAACTTAAATGAGATATGATAGCTT
CTTTATGGTCTAACATTCTTGCCAATACATTATCTTCATTCTGTTCCGGATTGTAATCCCTAATGAAAAAAATAGCTCCATGAGCAAAAGCCCCTGTCAT
GATGAACCCTGCAATGTATTGGTGATGAGTATATAAAGCAGCTTGAGTAGTAAAGTCTTGTGCTATGAATGCATAAGCAGGTAAAGAGTACATATGTTGA
GCTACTAAAGAAGTAATAACCCCTAAGGAAGCTAGAGCAAGACCTAATTGAAAATGAATCGAATTATTAATTGTATCATAAAGGCCTTTATGCCCACGTC
CTAATCGACCCCCCGGAGGAGTATGGGCTTCTAAAAGGTCTTTGATACTGTGCCCAATTCCGAAGTTAGTTCGATACATATGACCGGCAATGAGAAAAAT
AAATGCAATAGCTAAATGATGATGAGCAATATCGGTCAGCCATAAACTTTGTGTTTGTGGATGGAATCCCCCAAGAAGGGTCAGAATGGCAGTTCCCGCT
CCTTGAGTGGTACCAAATAAATGATTACTCGAATCAGGATTTTGGGCATAAAGATTCCACTGACCCGTCAGAAGGGGACCCAACCCCTGGGGATAGGGTA
ATACATCTAAGAAATTATTCCATCGAACGTACTCCCCCCTGGATCCGGGAATAGCAACATGAACTAAATGTCCTGTCCAAGCCAAAGAACTTACCCCGAA
AAGTCCTGACAAATGATGATTGAGACGAGATTCCGCGTTTTTGAACCACGAAAGGCTTGGCTTCCATTTGGGTTGTAGATGTAACCAACCCCCTATTAAG
GATAGCGTAGAAAGAAATAATAGAAAAAGAGCTCCAGTATAAAGATCTTCATTGGTGCGCAATCCAATTGTATACCACCACTGATAAACCCCAGAATAAG
CAATATTCACTGGACCGGCAGCACCTCCTCGAGTAAAGGCTTCCACCGCGGGTTGACCAAAATGAGGATCCCAAATGGCATGAGCAATAGGTCTTACGTG
TAAAGGATCCTGTATCCATGATTCAAAATTTCCTTGCCAAGCTACATGAAACAGATTTCCGGACGTCCATAGAAAGATTATTGCTAACTGCCCAAAGTGA
GAAGCAAAAATGTTCTGATAAAGACGTTCCTCAGTAATATCATCATGACTTTCGAAATCATGTGCGGTAGCAATACCAAACCAAATACGACGAGTAGTGG
GGTCCTGAGCTAAGCCTTGGCTAAACCTGGGAAATCTTAATTCCATAATGCCTTTCAAATCCTCCTAGCCACTATCCTACTGCAATAATTCTCGCTAAGA
AGAATGCCCATGTTGTGGCAATTCCACCCAGAAGGTAATGGGTTACTCCTACAGCACGTCCTTGTATAATGCTCAAGGCTCTAGGCTGAGTAGCAGGAGC
AACTTTTAATTTGTTATGAGCCCAAACGATAGATTCAATAAGTTCTTGCCAATAACCACGGCCGCTGAATAAAAACATTAAACTGAAAGCCCAGACAAAA
TGAGCGCCTAAGAAAAAAAGACCATATGCAGATAATGAAGAACCATAAGACTGAATTACTTGGGATGCCTGTGCCCACAAGAAATCTCGAAGCCAACCAT
TAATCGTAATGGAACTCTGTGCAAAGTTTCCCCCTGTGATATGAGTTACTATCCCTTGATCACTTATAGTACCCCAAACATCCGACTGCATTTTCCAACT
GAAATGGAAAATAACTACCGAAATGGAATTATACATCCAGAATAAACCTAAAAAAACATGATCCCAGGCGGATACTTGACATGTTCCCCCTCGCCCAGGC
CCGTCGCAAGGGAAGCGAAAGCCAAGATTTGCTTTATCAGGTATCAGACGGGAACTGCGAGCAAATAAAACACCTTTCAAAAGTATTAATACAGTCACAT
GGATGGTAAATGCGTGAATGTGATGGACTAAAAAATCTGCGGTTCCTAATGGAATAGGTAACAAAGCTACTTTGCCGCCTACAGCTACTAACTCGCCGCC
TCCCCACGTTAAGCTGGTACTTGTTGTTGCACCAGGAGCTGTTACGCCAGGCGCGCCAGCATGGATATTTTGTATCCATTGAGCAAAGATGGGTTGTAAT
TGTATGGCGGTATCCGAAAACATATCTTGGGGACGGCCTAAAGCACTCATGGTATCATTATGAATGTATAAGCCAAAACTGTGAAAACCCAGAAATATAC
ATACCCAGTTAAGGTGGGATATGATTGCATCGCGGTGTCTAAGGACGCGATCTAATAGATCGTTGTATCGAGTAGTTGGATCATAGTCTCTTACCATAAA
AATGGCTGCATGTGCAGCAGCACCGACTATTAGAAATCCGCCAATCCACATGTGATGTGTGAACAAGGAAAGTTGTGTACCATAGTCAGTAGCGAGGTAT
GGATAAGGGGGCATAGAGTACATATGATGAGCTACAACAATAGTTGTAGAGCCCAGCATAGCTAGGTTAAGAGATAATTGAGCATGCCATGACGTTGTTA
GGATTTCATAGAGACCCTTATGGCCTTGTCCTGTAAATGGGCCCTTATGAGCCTCCAAAATATCTTTAAGTCCATGACCAATACCCCAGTTGGTCCTATA
CATATGACCAGCGATCAGGAAAAGAATAGCAATAGCTAAATGATGGTGTGCAATATCACTCAACCATAGACCACCTGTTATTGGATCTAGTCCTCCGCGA
AAACTAAGAAATTCTGCATATTTGGACCAATTCAAGGTGAAAAAGGGGGTTGCCCCTTCGGCAAAACTAGGATAAAGTTGAGCCAAAAGGTCGCGATTCA
AGATAAATTCATGAGGAAGTGGTATCTCTTTAGGATCAACCCCAGCGTCGAGAAATTGGTTAATCGGTAAAGATACATGGATTTGGTGTCCCGCCCAAGA
AAGAGACCCAAGTCCTAATAACCCCGCTAAGTGGTGATTCAACATGGATTCCACATCTTGGAACCAGGCCAATTTGGGAGCAGCTTTGTGATAATGGAAC
CAACCAGCAAAAAGCATTAACGATGCAAAAATCAATGCACCAATTGCGGTACAATAGAGTTGTAATTCACTAGTTATTCCGGATGCTCGCCAAATCTGAA
AAAACCCGGAGGTTATTTGGATTCCTCGGAAACCCCCGCCTACATCACCATTCAAAATTTCTTGCCCTACTATTGGCCAAACTACCTGAGCACTGGGTCC
AATATGAGTAGGATCACTTAGCCATGCTTCATAATTGGAAAAACGGGCACCGTGGAAGTACATGCCACTCAACCAAAGAAAGATAATGGAGAGTTGACCG
AAGTGAGCACTAAAGACTTTTCGGGAGATCTCCTCCAAATCACCGGTATGACTATCGAAATCGTGAGCATCAGCATGTAGGTTCCAGATCCAAGTGGTAG
TATCGGGACCCTTAGCTATTGTTCTTGAGAAATGCCCGGGTCTGGCCCATTCCTCAAAAGATGTTTTTACAGGATCCCTATCCACAACAATTTTAACTTC
TGGTTCCGGCGAACGAATAATCATTAAGTCCTCCTCTTTCCGGACAAGACATACAAAGAGACCCGCCAACTGTCTTTTTATTGAATCTTTGAAAGATAGA
TATTCTGATTAGTCCTTTTCTTTACTATCTACCGTCCTTCTATTTTTTTTTAGTTATTCACTGGAACAATTATATATTGAAGTCAATCCGAGGCAAGTGT
TCGGATCTATTATGACATAAGGATTAGGTGC