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Detailed information on CNT30526005


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382680Phaseolus vulgarisManihot esculenta48.8448.8486.49148forward
CNT30632032Phaseolus vulgarisVigna unguiculata92.7446.8386.12281reverse complement
CNT30200216Phaseolus vulgarisPisum sativum87.1388.8979.92264forward
CNT30710185Phaseolus vulgarisGlycine max82.8482.5784.06251forward
CNT3048431Phaseolus vulgarisPrunus dulcis21.7817.1992.4266forward
CNT30158859Phaseolus vulgarisPistacia vera22.7724.0491.369reverse complement
CNT3084248Phaseolus vulgarisVigna radiata93.0792.7686.88282forward
CNT30171787Phaseolus vulgarisTrifolium pratense84.1684.4482.75255forward
CNT30146769Phaseolus vulgarisMedicago truncatula77.5677.383.4235forward
CNT30478989Phaseolus vulgarisArabidopsis halleri20.4620.2690.3262forward
CNT30619930Phaseolus vulgarisCajanus cajan78.5539.685.29238forward
CNT30155059Phaseolus vulgarisPrunus persica21.7821.590.9166forward
CNT30704539Phaseolus vulgarisPrunus avium21.786.1690.9166reverse complement
CNT3058749Phaseolus vulgarisAmborella trichopoda18.8120.8891.2357forward
CNT30176611Phaseolus vulgarisVigna angularis94.0694.3784.91285forward
CNT30723394Phaseolus vulgarisLupinus angustifolius85.8186.0983.08260forward

Expression of CNT30526005

Peptides detected in this lncRNA

>peptide 1 (39 aa)
PSWVTLACDPSGGTKVIEQGFGITKLAWWLHHAGLPTPS*

Sequence

>CNT30526005
GCCGAGCTGGGTAACACTAGCTTGTGACCCAAGTGGGGGCACCAAGGTGATTGAACAAGGCTTTGGCATTACCAAGTTGGCTTGGTGGTTGCATCATGCT
GGCTTGCCCACTCCAAGCTGAGAGTTGAGCCATGGGAACTTTGCGAAGGCATTGGTCTCCTGGTTCCTAGACGAGAGGGCACAGCGTGAGGCTGGCTTCA
CAGAGCAGCGACTACCTCTGGCTCTTGGCAGTGGAGGGATCACAGGCTGCTGCACCTTCAGGCCACTTAGCTTGGTGAGCCTGCCTCTTGAACAATCACT
TTT