Detailed information on CNT30632032


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382474Vigna unguiculataManihot esculenta10.8321.4589.2365reverse complement
CNT30526005Vigna unguiculataPhaseolus vulgaris46.8392.7486.12281reverse complement
CNT30711330Vigna unguiculataGlycine max25.6750.8383.77154reverse complement
CNT3045920Vigna unguiculataPrunus dulcis1325.4988.4678reverse complement
CNT30158859Vigna unguiculataPistacia vera12.526.1389.3375forward
CNT3085911Vigna unguiculataVigna radiata51.59.5287.7309reverse complement
CNT30715637Vigna unguiculataMalus domestica golden11.8324.9190.1471forward
CNT30619930Vigna unguiculataCajanus cajan38.538.4482.68231reverse complement
CNT30155059Vigna unguiculataPrunus persica13.6726.7185.3782reverse complement
CNT30408305Vigna unguiculataPapaver somniferum10.3321.4590.3262forward
CNT3029924Vigna unguiculataTheobroma cacao1223.3884.7272reverse complement
CNT30121042Vigna unguiculataCitrus clementina10.3320.688.7162forward
CNT30726065Vigna unguiculataLupinus angustifolius24.8348.3887.25149reverse complement

Expression of CNT30632032

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MKKGGSSRAGLTKLSDIEVRQPVVPPLSRTGGGRCSVKPA*

>peptide 2 (53 aa)
MAQLSTWSGQASTMQPLGQLSKLKPCPVTLMPPLGSQADVTQLGEQTCLSDDL*

>peptide 3 (44 aa)
MLSQRFHGSTLNLEWASQHNATTRSAQQAKALSSHPDAPTWVTS*

>peptide 4 (31 aa)
MFVRRFIKTCFSNILKDVGLAYSNLKCIEFS*

Sequence

>CNT30632032
AAAATGTTTTTCATTGTGTCACCCCTCGTGTCCATGTGTATAATTGAATAATAAACAATAGACTATAACATCTATGGGAAACTCTGTTTCTGATCAACAG
CTATTTGGAGATCATGAATGCAGCGTGATTGTTTCTCATCTAAGAAGCTAAGCTTGTTAACGGTGGTGGAAAAATGAAAAAAGGTGGCAGTTCAAGAGCT
GGGCTCACCAAGCTTAGTGACATAGAGGTGCGGCAGCCTGTGGTCCCTCCACTGTCAAGAACCGGAGGTGGTCGCTGCTCTGTGAAGCCAGCCTAACGCG
GTGCCCTCCTGTCTAGGAACCAAGAAACCAATGCTTTCGCAAAGATTCCATGGCTCAACTCTCAACTTGGAGTGGGCAAGCCAGCACAATGCAACCACTA
GGTCAGCTCAGCAAGCTAAAGCCTTGTCCAGTCACCCTGATGCCCCCACTTGGGTCACAAGCTGACGTTACCCAGCTCGGCGAGCAGACATGTTTGTCAG
ACGATTTATAAAGACTTGTTTTTCTAATATTCTAAAAGATGTGGGACTTGCATATAGCAATTTGAAGTGCATAGAGTTTTCTTGAGTTGGAAACCGAGGC