Detailed information on CNT30619930


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514222Cajanus cajanJuglans regia19.337.7984.48116forward
CNT30700736Cajanus cajanQuercus lobata21.9625.8387.12132forward
CNT30727290Cajanus cajanCorchorus capsularis23.7946.8983.22143forward
CNT3069056Cajanus cajanQuercus suber22.4612.7782.22135forward
CNT30379183Cajanus cajanManihot esculenta20.1342.6184.3121reverse complement
CNT30526005Cajanus cajanPhaseolus vulgaris39.678.5585.29238forward
CNT30632032Cajanus cajanVigna unguiculata38.4438.582.68231reverse complement
CNT30200216Cajanus cajanPisum sativum23.4647.4781.56141forward
CNT30711330Cajanus cajanGlycine max38.4476.2487.01231forward
CNT30158859Cajanus cajanPistacia vera10.6522.390.6264reverse complement
CNT30587366Cajanus cajanMusa acuminata15.3124.6685.8792forward
CNT3084261Cajanus cajanVigna radiata27.1253.6287.73163forward
CNT30538764Cajanus cajanBrassica napus11.8123.4390.1471forward
CNT30238127Cajanus cajanBrassica oleracea11.8123.2890.1471forward
CNT30171945Cajanus cajanTrifolium pratense25.1256.3488.08151reverse complement
CNT30145955Cajanus cajanMedicago truncatula25.7951.1687.74155forward
CNT30264180Cajanus cajanBrassica rapa13.1426.1687.3479forward
CNT30715507Cajanus cajanMalus domestica golden13.1425.5789.8779forward
CNT30409088Cajanus cajanPapaver somniferum10.9820.1889.3966reverse complement
CNT30175714Cajanus cajanVigna angularis26.9653.2985.8162forward
CNT30724469Cajanus cajanLupinus angustifolius24.9649.1888.67150forward

Expression of CNT30619930

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MVYICLCLSVQPFLSHFFLGLILLTVELVRFWCCKFVMLFPLMDMDTLFYLL*

Sequence

>CNT30619930
TAGCTAACATTAGCTTGTGACCCAAGTGGGGGCATCAATGTGATGGGACAAGGCTTTGCCTTAGCCAGGCTGGGTGGCTGCATTATGCTGGCCTGCCCGC
TCCAAGTCGAGAGTTGAGTCATGGGATCTGGGCGAAGGCACAGGTCTCCTGGTTCCTAGACTAGAGGGCACCGCGTGAGGCTGGTTTCACAGAGCAGCGA
TCACCTCTGCCTCTCGACAGTGGAGGGATTACAGGCTGGTTTCACAGAGCAGCGATCACCCCTGCCTCTCGACAGTGGAGGGATTACAGGCTGCTGCACT
TCTAGCCCATGAAGCCCGACTAACTTAGCTCTTGAACCATCATTTTTTTTTCCTTGTCAAGCTAGGCTGTGGTGATGGTATATATATGTTTATGTTTGTC
TGTTCAACCATTTCTTTCTCACTTTTTTTTGGGATTGATTCTCTTGACTGTTGAATTGGTTAGATTTTGGTGTTGTAAATTTGTAATGTTGTTTCCCTTG
ATGGATATGGATACACTCTTCTACTTGCTTTGAATTTTGGTGACAACCTTAGTGGATTTTATGGTCATGGACTGATTTTCCTATCCAGACGATTAATGCA
G